FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9351 contig Ccv1_Contig9351:3..695. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THEFY (Anthranilate phosphoribosyltransferase OS=Thermobifida fusca (strain YX) GN=trpD PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.068e-26
Identity = 64/159 (40.25%), Postives = 96/159 (60.38%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            ++ LI  L++   LT  + + +++ +++  A +A I+ F + LRAKGE+  E+ GLA+ M+ +A  +   G  +DIVGTGGD A+TVN+ST ASI+A+A GA+V K             DVLE LGV+IDLDP       +E  I F  +  YHP +K+
Sbjct:    6 WSHLISALLNGTSLTADDTKWAMNEIMSGSATDAQIAGFAIALRAKGESVAEVRGLAQGMLDHAVTISVPGATLDIVGTGGDRAHTVNVSTMASIVASAAGARVVKHGNRAASSSCGTADVLERLGVIIDLDPADAVAVAEEVDITFCFAPLYHPSLKY 164          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_RHILW (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26
Identity = 67/151 (44.37%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H  M+ V
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVTAMRSKMLTVEAPEDAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQLHHSAMRHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_METRJ (Anthranilate phosphoribosyltransferase OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.313e-26
Identity = 67/147 (45.58%), Postives = 88/147 (59.86%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L  AEA+A+ D LL+ E       AFL  L+ +GE+  EIVG A AM    T+V    +AVD+VGTGGD + +VN+ST A+I+ AACG  VAK             DVL ALGV + LDP    RC+DEAG+ F+ +  +HP M+ V
Sbjct:   17 LDRAEARAAFDDLLSGEVTPVQAGAFLTALKVRGESVEEIVGAAEAMRARMTRVAAPENAVDVVGTGGDHSGSVNVSTLAAIVVAACGVPVAKHGNRAATSRSGAADVLAALGVRLGLDPAAQARCLDEAGLCFLFAQAHHPAMRHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_RHISN (Anthranilate phosphoribosyltransferase OS=Rhizobium sp. (strain NGR234) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 64/151 (42.38%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      VE   DA+DIVGTGGDGA T NIST AS++ A  G  VAK             D L  LGV +D+ PE + RC+ EAG+GFM + ++H  M+ V
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPEDAIDIVGTGGDGAGTYNISTLASLIVAGAGVPVAKHGNRALSSKSGTADALSCLGVKLDIGPEAIARCIREAGVGFMFAQQHHSAMRHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH  MK V
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNV 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.939e-26
Identity = 65/160 (40.62%), Postives = 95/160 (59.38%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH  MK V
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNV 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_RHOP2 (Anthranilate phosphoribosyltransferase OS=Rhodopseudomonas palustris (strain HaA2) GN=trpD PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26
Identity = 68/160 (42.50%), Postives = 89/160 (55.62%), Query Frame = 2
Query:  212 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            F  +I  + +   LT  EA  + D +++ +A  + + A L+ LR +GET  EI G    M      V    DAVD+VGTGGDG+ +VN+ST  S + A CG  VAK             DVL ALGV ID+ P+ V RCV EAGIGFM +  +HP MK V
Sbjct:    4 FKAVIAKVATGASLTRDEAANAFDAMMSGDATPSQMGALLMGLRVRGETVDEITGAVTTMRAKMLTVAAPPDAVDVVGTGGDGSGSVNVSTCTSFVVAGCGVPVAKHGNRALSSKSGAADVLNALGVKIDITPDHVGRCVAEAGIGFMFAPTHHPAMKNV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_RHILO (Anthranilate phosphoribosyltransferase OS=Rhizobium loti GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26
Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L+  EA+ + D +++ +A    I  FL+ LR +GET  EI G    M     +VE    A+DIVGTGGD +++VNISTG++ + AA G  VAK             DVL ALGV ID+ P+ + RC+ EAG+GFM +  +HP MK V
Sbjct:   17 LSFEEAREAFDIIMSGDATPGQIGGFLMALRVRGETVSEISGAVATMRAKMLRVEAPAGAIDIVGTGGDNSHSVNISTGSAFVIAAAGVPVAKHGNRGLSSLTGAADVLIALGVKIDIPPDAIGRCIHEAGVGFMFAPAHHPAMKHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_RHIL3 (Anthranilate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=trpD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.063e-26
Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 2
Query:  239 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            SR  LT  EA+++ D L++ +A  + I  FL+ LR +GET  EIVG   +M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV +D+ PE + RC+ EAG+GFM +  +H  M+ V
Sbjct:   13 SREPLTREEARSAFDILMSGQATPSQIGGFLMALRVRGETVDEIVGAVASMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLAALGVKLDVGPEIISRCIAEAGVGFMFAQMHHSAMRHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_SALRD (Anthranilate phosphoribosyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=trpD PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.184e-25
Identity = 67/160 (41.88%), Postives = 94/160 (58.75%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            N L+  +     L+  EA+ ++  +++  A +  I+A L+ LR +GET  E+VG  + M ++A  VE      +D+ GTGGDGA+T NIST AS +AA  GA VAK             DVLEALGV IDL+ EGV  C+ EAGI F+ +  +HP M+ V
Sbjct:    2 NTLLQTIADGDPLSRPEAEEAMATMMSGSARDEHIAALLMGLRTRGETLDELVGFTKTMREFAVSVETDDPQTIDLCGTGGDGASTFNISTTASFIAAGAGATVAKHGNRSVSSQSGSADVLEALGVQIDLEKEGVEHCLHEAGIAFLFAPFFHPAMRHV 161          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_THEFY4.068e-2640.25Anthranilate phosphoribosyltransferase OS=Thermobi... [more]
TRPD_RHILW5.313e-2644.37Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_METRJ5.313e-2645.58Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_RHISN6.939e-2642.38Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_CLOK56.939e-2640.63Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOK16.939e-2640.63Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_RHOP29.063e-2642.50Anthranilate phosphoribosyltransferase OS=Rhodopse... [more]
TRPD_RHILO9.063e-2642.86Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIL39.063e-2643.05Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_SALRD1.184e-2541.88Anthranilate phosphoribosyltransferase OS=Saliniba... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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