FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HAEIN (Anthranilate phosphoribosyltransferase OS=Haemophilus influenzae GN=trpD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18
Identity = 56/160 (35.00%), Postives = 88/160 (55.00%), Query Frame = 2
Query:  215 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            N+L++ L S   L+ +E+ A  + ++  E     I+A L+ L+ +G    EI G   A ++ A           DIVGTGG+G NT+NIST ++I+AA+ GAK+AK             DVL AL V +++ PE  R+ +DE G+ F+ + +YH   + V
Sbjct:    4 NQLLEQLYSGHSLSTSESTALFNAVIQGELSNEQIAAMLIALKVRGANTEEISGAVAASLQNAKAFPYPNYPFADIVGTGGNGQNTINISTTSAIVAASMGAKIAKHGNRSVSSKSGASDVLTALSVNVNVTPEQARQALDEIGVCFLFAQQYHSGFRHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_FRATN (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18
Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFVR 691
            ++D L +  DL+  E+    DY +  + +  L ++ L  L+ K ET  EI     A++    +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    +++R
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILTALKLKKETSIEIASAVEALLDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNLGFLFAPFYSEGFRYIR 165          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CLAM3 (Anthranilate phosphoribosyltransferase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18
Identity = 61/161 (37.89%), Postives = 85/161 (52.80%), Query Frame = 2
Query:  197 PLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTV-NISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHP 673
            P  P +  LI  LI    L+ +E+  ++  ++  EA  A +   LV LRA GET  EIVG   A+++ A  ++    A+DIVGTGGD    V NIS+ AS++AAA G  V K             DVL ALGV + + PE V   + E GI +  +  +HP
Sbjct:    2 PSAPTWPALITTLIEGRHLSVSESTWAMRQVMRGEATPAQLGGLLVALRASGETVDEIVGFRDAVLEEALPLDADPRALDIVGTGGDPYGAVLNISSVASVIAAAAGVPVIKHGNRGASSASGASDVLTALGVDLSITPERVAEVLRETGITYAHAALFHP 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPG_SALTY (Anthranilate synthase component II OS=Salmonella typhimurium GN=trpD PE=1 SV=4)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 67/202 (33.17%), Postives = 100/202 (49.50%), Query Frame = 2
Query:  101 RNCGF--------TTAGNNPRCRELTAIQTPQPAVSDNTRPLTPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAT---KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            R CGF        TT G   R  E T     Q     NT         +++ L     LT+ E+      ++  E     ++A LV ++ +GE   EI G A A+++ A    + E L    DIVGTGGDG+N++NIST ++ +AAACG KVAK             D+L A G+ +D++ +  R+ +DE G+ F+ + KYH
Sbjct:  163 RVCGFQFHPESILTTQG--ARLLEQTLAWAQQKLEPTNT------LQPILEKLYQAQTLTQQESHQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPEYL--FADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNADKSRQALDELGVCFLFAPKYH 354          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_PYRKO (Anthranilate phosphoribosyltransferase OS=Pyrococcus kodakaraensis GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 51/131 (38.93%), Postives = 75/131 (57.25%), Query Frame = 2
Query:  290 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            L  +D  LI A+L  L+ KG T  E+ GLARAM   A K++ LG   D  GTGGDG++T+N+ST ++++ +A   +VAK             +VLEALG+ I + PE  R  V+     F+ +  YHP ++
Sbjct:   25 LKGSDGVLIGAYLAALQTKGYTGEELAGLARAMRDSAVKLD-LGKVADTAGTGGDGSSTINVSTASALILSAF-TRVAKHGNVSITSKSGSANVLEALGLNIRVSPERAREMVESTNFTFIFAPAYHPALR 153          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_LISW6 (Anthranilate phosphoribosyltransferase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLNEADEALIS-----AFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            ++ L+ +V   E   +A ++ L  E  E  +S     AFL+ L+ KGET  E+ G+A AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V
Sbjct:    1 MESLLQKVYDQENLTKAEMNILATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAEAMQEVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_JANSC (Anthranilate phosphoribosyltransferase OS=Jannaschia sp. (strain CCS1) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18
Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L+ A+A+ + + +    A  A +   ++ +RA+GE+  E    A+ M     KV     A+DIVGTGGDG  T+NIST  + + A  G  VAK             DVL  +G+ + +    V + + EAGIGFMM+  +HP +K V
Sbjct:   22 LSRAQAEEAFNLMFEGLASPAQMGGLIMAIRARGESVAEYAAAAQVMRDRCVKVSAPDGAMDIVGTGGDGMGTLNISTATAFVVAGAGVPVAKHGNRNLSSKSGAADVLTQMGINVMVGAAVVEQSLKEAGIGFMMAPMHHPAVKHV 168          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_YERPY (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 51/152 (33.55%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            L + L     +++ E+Q     ++  E D + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELDPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYH 155          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_SULTO (Anthranilate phosphoribosyltransferase OS=Sulfolobus tokodaii GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            EL+  +I R +LTE EA++  + ++  E  E + + FLV L  KGE+  EI G A+AM   A  +     A+D  GTGGDG NT+N+ST  ++L +     VAK             DVLEALG  I + PE   + + E+   F+ +  YHP MK V
Sbjct:    5 ELLRKIIRRENLTEDEARSIANSVMKAEVPEIVTAGFLVGLATKGESVEEITGFAKAMRDNALHIN-FPSALDTAGTGGDGLNTLNVSTAVALLISQV-YPVAKHGNRAVSGKSGSADVLEALGYNIIVKPELAEKLIKESKFVFLFAQLYHPAMKNV 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_LISIN (Anthranilate phosphoribosyltransferase OS=Listeria innocua GN=trpD PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L+  +  + +L++AE    + +       +  I+AFL+ L+ KGET  E+ G+A AM + A +V+   G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V
Sbjct:    4 LLQKVYDQKNLSKAEMNIVATEIFEGRLSKTKIAAFLMALKVKGETAEEMAGIAEAMQQVAIQVDFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_HAEIN6.955e-1835.00Anthranilate phosphoribosyltransferase OS=Haemophi... [more]
TRPD_FRATN6.955e-1833.96Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_CLAM36.955e-1837.89Anthranilate phosphoribosyltransferase OS=Clavibac... [more]
TRPG_SALTY9.084e-1833.17Anthranilate synthase component II OS=Salmonella t... [more]
TRPD_PYRKO9.084e-1838.93Anthranilate phosphoribosyltransferase OS=Pyrococc... [more]
TRPD_LISW69.084e-1835.40Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_JANSC9.084e-1834.69Anthranilate phosphoribosyltransferase OS=Jannasch... [more]
TRPD_YERPY1.186e-1733.55Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_SULTO1.186e-1737.97Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_LISIN1.186e-1734.18Anthranilate phosphoribosyltransferase OS=Listeria... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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