FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_BACHD (Anthranilate phosphoribosyltransferase OS=Bacillus halodurans GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            L E +A+  +D ++  EA  + I++ L +LR +GET  E+ G ARAM +++ ++E      VD  GTGGD   T NIST  ++L +A G  VAK             DVLEAL + I   PE     + +  + FM +  YH  MK
Sbjct:   15 LAERKAEQVMDAIMKGEATASQIASLLTVLRFRGETVAEMTGFARAMRRHSIQIEHSFSQVVDTCGTGGDDVGTFNISTATALLVSALGVPVAKHGNRAVSSKSGSADVLEALQIPIQSSPEEATASLQKHNMCFMFAPLYHVAMK 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ACIF5 (Anthranilate phosphoribosyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            ++++ +++  DL+  E +     ++  A   A I A L+ LR KG+   E+VG  +A+    T+VE   D  +D  GTGGD  +T NIST ++++AAA GA+VAK             DVLEA G+ +D+ P  V   ++  GIGF+ +  +H  M++
Sbjct:    5 DILEQIVAGQDLSRKETETVFAAIMAGAWTPAQIGALLMGLRMKGQRVEELVGATQALRACMTRVEVSTDHLLDTCGTGGDALSTFNISTVSAVVAAAGGARVAKHGNRSMVSRSGSADVLEAAGLRMDMSPAEVADSIERIGIGFLFAPAHHGAMRY 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ACIF2 (Anthranilate phosphoribosyltransferase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=trpD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.024e-17
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNEA-DEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            ++++ +++  DL+  E +     ++  A   A I A L+ LR KG+   E+VG  +A+    T+VE   D  +D  GTGGD  +T NIST ++++AAA GA+VAK             DVLEA G+ +D+ P  V   ++  GIGF+ +  +H  M++
Sbjct:    5 DILEQIVAGQDLSRKETETVFAAIMAGAWTPAQIGALLMGLRMKGQRVEELVGATQALRACMTRVEVSTDHLLDTCGTGGDALSTFNISTVSAVVAAAGGARVAKHGNRSMVSRSGSADVLEAAGLRMDMSPAEVADSIERIGIGFLFAPAHHGAMRY 162          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_SULAC (Anthranilate phosphoribosyltransferase OS=Sulfolobus acidocaldarius GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 58/148 (39.19%), Postives = 80/148 (54.05%), Query Frame = 2
Query:  248 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            DL+  +++A  + L+  E  E  +SA L  L  KGE+F EIVG ARAM   A K+    +A+D  GTGGDG  T+N+ST  +I+ +     VAK             DVLEALG  I++ PE   + + E    F+ +  YHP MK V
Sbjct:   10 DLSTEDSEAIANALMKGEIPEIQVSALLTSLAMKGESFEEIVGFARAMRNNAIKI-SYPEALDTAGTGGDGLGTINVSTITAIILSQL-FPVAKHGNRSVSGKSGSADVLEALGYNINIAPELANKLIKENNFVFLFAQIYHPAMKNV 155          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_LISMH (Anthranilate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 2
Query:  314 ISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            I+AFL+ L+ KGET  E+ G+A+AM + A +V    G A+D  GTGGD +N+ NIST ++ + AA G  VAK             DV + LG+ I++ PE +   +++ GI F+ +   HP MK+V
Sbjct:   36 IAAFLMALKVKGETAEEMAGIAQAMQQVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKYV 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_DICT6 (Anthranilate phosphoribosyltransferase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17
Identity = 50/126 (39.68%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHP 673
            E  EA + A L+ LR KGE   EI G    + + A K+     AVD+ GTGGD +NT NIST  +   A+ G +VAK             DV+EALG     +PE + R +DE GIG + +  +HP
Sbjct:   31 EITEAQLGAVLLGLRLKGENPEEIAGFVDVLHEKAKKIPNRTPAVDVCGTGGDKSNTFNISTAVAFTLASLGVRVAKHGNRAMSSKAGSIDVIEALGFKCSDNPEEIARDIDEKGIGIIFAPYFHP 156          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_YERPS (Anthranilate phosphoribosyltransferase OS=Yersinia pseudotuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYH 155          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_YERPP (Anthranilate phosphoribosyltransferase OS=Yersinia pestis (strain Pestoides F) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYH 155          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_YERPN (Anthranilate phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH
Sbjct:    4 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYH 155          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_YERPE (Anthranilate phosphoribosyltransferase OS=Yersinia pestis GN=trpD PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17
Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYH 670
            L + L     +++ E+Q     ++  E + + ++A L+ ++ +GET  EI G A+A++  A           DIVGTGGDG N++NIST ++ +AA+CG KVAK             D+L A G+ +D+  E  R  +D+ G+ F+ + +YH
Sbjct:    5 LFEKLFRAESMSQEESQQLFAAIVRGELEPSQLAAVLISMKVRGETPAEIAGAAQALLADAQHFPRPDYLFADIVGTGGDGTNSINISTASAFVAASCGVKVAKHGNRSVSSRSGSSDLLAAFGIRLDMSAEQSRLALDDLGVCFLFAPQYH 156          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BACHD2.024e-1736.30Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_ACIF52.024e-1734.18Anthranilate phosphoribosyltransferase OS=Acidithi... [more]
TRPD_ACIF22.024e-1734.18Anthranilate phosphoribosyltransferase OS=Acidithi... [more]
TRPD_SULAC2.643e-1739.19Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_LISMH2.643e-1739.68Anthranilate phosphoribosyltransferase OS=Listeria... [more]
TRPD_DICT62.643e-1739.68Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_YERPS3.452e-1732.89Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPP3.452e-1732.89Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPN3.452e-1732.89Anthranilate phosphoribosyltransferase OS=Yersinia... [more]
TRPD_YERPE3.452e-1732.89Anthranilate phosphoribosyltransferase OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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