FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_LACPL (Anthranilate phosphoribosyltransferase OS=Lactobacillus plantarum GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 2
Query:  245 VDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            +D T ++ Q   + +  +A +A I +FL  L  K  T  EI G A AM   A   +     ++IVGTGGD +N+ NIST  +++ AA G  V K             DVLEALG+ IDL P      ++     FM + +YH  M+FV
Sbjct:   15 LDFTMSQ-QVITEIMKGQATDAQIGSFLTALAIKKATIDEIAGAATAMRSQALPFKVKRPTLEIVGTGGDRSNSFNISTTTALVVAAAGVPVTKHGNRAASSKSGAADVLEALGIKIDLTPAQSLALLERTNFAFMYAREYHQAMRFV 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HELAH (Anthranilate phosphoribosyltransferase OS=Helicobacter acinonychis (strain Sheeba) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 50/156 (32.05%), Postives = 83/156 (53.21%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            +++ L  + DL + E +    +++NE      + A L  L+ KGE+  EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++   +  C+ E+  GF+ +  YH   K
Sbjct:    4 ILNALYHQKDLNDEEVKRLFTFIINEEVSPTQLGAILCALKIKGESLSEISAAATTLLEHAPKPFKSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLPMAKHGSRSVSSHSGSADLLENLGVNIEMNRAQLENCLKESHFGFLFAPLYHQSFK 159          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_FRATF (Anthranilate phosphoribosyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=trpD PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 53/159 (33.33%), Postives = 85/159 (53.46%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFVR 691
            ++D L +  DL+  E+    DY +  + +  L ++ L+ L+ K ET  EI     A+     +   + GD   IVGTGGDG NT+NIST A+I+AA  G KVAK             D+LE+ GV I+L P+  ++C++   +GF+ +  Y    + ++
Sbjct:    7 IVDKLYNLEDLSYQESYQLFDYFIKGQIELPLQTSILIALKLKKETSIEIAAAVEALFDNTKEFPKIKGDLAGIVGTGGDGFNTINISTTAAIVAATAGYKVAKHGGRSVSSKSGSFDLLESFGVNIELAPDQTKQCLELYNMGFLFAPFYSDGFRHIK 165          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_ERYLH (Anthranilate phosphoribosyltransferase OS=Erythrobacter litoralis (strain HTCC2594) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 52/144 (36.11%), Postives = 77/144 (53.47%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCM 679
            +++ EA+    ++L+ EA E  I+ FL+ +  + ET  EI G ARA+      VE    AVD  GTGGDG +T+N+ST  S++ AA G  VAK             D LEALG+ ++       + + E GI F+ +  +HP M
Sbjct:   11 MSQDEAEEVFGWILDGEASEEEIARFLLAMTERSETADEIAGAARALRDRLIPVEAPEGAVDCCGTGGDGHHTLNVSTAVSLVVAAAGVPVAKHGNRAASSKSGAADTLEALGLDMEAVGRTAEKTLAEIGICFLFAKNHHPAM 154          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CORGL (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum GN=trpD PE=3 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  290 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFVR 691
            + E D+  I+A L  +R +GE F +I G A+A +  A    + G G  +D  GTGGDGANT+NI+TGAS++AA+ G K+ K             DVLEAL + + LD +   +  + +   F+ +  Y+P +  V+
Sbjct:   33 VGEYDDVHIAALLATIRTRGEQFADIAGAAKAFLAAARPFPITGAG-LLDSAGTGGDGANTINITTGASLIAASGGVKLVKHGNRSVSSKSGSADVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQ 167          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_CORGB (Anthranilate phosphoribosyltransferase OS=Corynebacterium glutamicum (strain R) GN=trpD PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  290 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFVR 691
            + E D+  I+A L  +R +GE F +I G A+A +  A    + G G  +D  GTGGDGANT+NI+TGAS++AA+ G K+ K             DVLEAL + + LD +   +  + +   F+ +  Y+P +  V+
Sbjct:   33 VGEYDDVHIAALLATIRTRGEQFADIAGAAKAFLAAARPFPITGAG-LLDSAGTGGDGANTINITTGASLIAASGGVKLVKHGNRSVSSKSGSADVLEALNIPLGLDVDRAVKWFEASNFTFLFAPAYNPAIAHVQ 167          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_OCHA4 (Anthranilate phosphoribosyltransferase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 49/147 (33.33%), Postives = 79/147 (53.74%), Query Frame = 2
Query:  251 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L+  +++A+ D +++ +A  + I   L+ LR +GET  EI G   +M      V    +A+DIVGTGGD + + N+S+ ++ + A  G  VAK             D L ALG+ I+ D   + R + EAG+GFM +  +H  M+ V
Sbjct:   17 LSLEDSRAAFDIMMSGQATPSQIGGLLMALRVRGETVPEIAGAVASMRSRMLGVSAPNNAIDIVGTGGDQSGSYNVSSCSAFVVAGAGVPVAKHGNRALSSRSGAADALAALGINIEADASIIGRSITEAGLGFMFAPMHHSAMRHV 163          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_MANSM (Anthranilate phosphoribosyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKF 685
            E     ++  L+ L+ +GET  EI G   A++  A           DIVGTGGD A+T+NIST ++I+AA+ G K+AK             DVL ALGV I +  E  R+ +DE GI F+ + +YH   K+
Sbjct:   41 ELSNEQLAGALIALKIRGETIDEITGAVTALLAAAEPFPAPDYPFADIVGTGGDNADTINISTASAIVAASMGLKIAKHGNRSVSSKTGASDVLTALGVNIRMSTEQARKALDEIGIAFIFAQQYHLGFKY 171          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HELPG (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori (strain G27) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            ++++ L  + DL + E +     +++E      + A L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+NIST A+++A++ G  +AK             D+LE LGV I+++P  +  C  +   GF+ +  YH   K
Sbjct:    3 DILNALYHQKDLNDGEVKKLFTLIIHEKVSPVQLGAILCALKIKGESFKEISVAATTLLEHAPKPFNSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLPMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQTHFGFLFAPLYHQSFK 159          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_FLAJ1 (Anthranilate phosphoribosyltransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 51/158 (32.28%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            +++ LI+   L++ EA+  L  + + + + + ISAFL +   +  T  E+ G   A+++   +++    + +D+ GTGGDG +T NIST AS +AA  G KVAK             +V+E +G+    DP  + +C+D+AGI  + +  +HP MK V
Sbjct:    4 ILNKLINHEVLSKEEAKNVLINISSGQYNPSQISAFLTVFMMRSITIDELSGFREALLELCIRIDLSAYNTIDLCGTGGDGKDTFNISTLASFVAAGAGIKVAKHGNYGVSSISGSSNVMEKMGIKFSNDPSFLEKCIDQAGICVLHAPLFHPAMKNV 161          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_LACPL4.508e-1735.81Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_HELAH4.508e-1732.05Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_FRATF4.508e-1733.33Anthranilate phosphoribosyltransferase OS=Francise... [more]
TRPD_ERYLH4.508e-1736.11Anthranilate phosphoribosyltransferase OS=Erythrob... [more]
TRPD_CORGL4.508e-1736.03Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_CORGB4.508e-1736.03Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_OCHA45.888e-1733.33Anthranilate phosphoribosyltransferase OS=Ochrobac... [more]
TRPD_MANSM5.888e-1738.17Anthranilate phosphoribosyltransferase OS=Mannheim... [more]
TRPD_HELPG5.888e-1731.85Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_FLAJ15.888e-1732.28Anthranilate phosphoribosyltransferase OS=Flavobac... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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