FC930835

Overview
NameFC930835
Unique NameFC930835
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_DICTD (Anthranilate phosphoribosyltransferase OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17
Identity = 49/126 (38.89%), Postives = 67/126 (53.17%), Query Frame = 2
Query:  296 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHP 673
            E  EA + A L+ LR KGE   EI G    + + A KV     A+D+ GTGGD +NT NIST  +   A+ G KVAK             DV+EALG     +PE + + +D+ GIG + +  +HP
Sbjct:   31 EITEAQLGAILLGLRLKGENPEEIAGFVDVLHEKAKKVPNKTPAIDVCGTGGDKSNTFNISTAVAFTLASLGIKVAKHGNRAMSSKAGSIDVIEALGFKCSDNPEEIAKDIDDKGIGIIFAPYFHP 156          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_STRSV (Anthranilate phosphoribosyltransferase OS=Streptococcus sanguinis (strain SK36) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            E+I  L    DL+ AE    ++ ++     E+ I AFL+ L+ KGET  E   LA+ M  +A ++   +  A+D  GTGGD + + NIST A+ + A  G K+AK             DVLEALG+ +DLD   + +  ++ GI F+ +   HP MK++
Sbjct:    3 EIIAKLADFKDLSSAEMTDVIERIVTGRVTESQIVAFLLGLKMKGETIEERTALAQVMRGHAKQIPTTIRTAMDNCGTGGDKSFSFNISTTAAFVLAGGGIKMAKHGNRSISSKSGSADVLEALGINLDLDAASLGKVFEQTGIVFLFAKNMHPAMKYI 161          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_METHJ (Anthranilate phosphoribosyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 56/152 (36.84%), Postives = 76/152 (50.00%), Query Frame = 2
Query:  233 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAT--KVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCM 679
            ++S  DL   EA+  +  + + +  +A I + L  L  KG T  EI   A  +   A   K +  G  VD  GTGGDGA+T NIST A+++AAA G +V K             DVLEALG+ I L PE     V    I F+ +  YHP +
Sbjct:    9 VVSMQDLAPDEARDLMTSIADGKVTDAQIGSILTALSMKGVTAHEITAFAHVLRDRAVQLKTDTSGTFVDTCGTGGDGAHTFNISTAAALVAAAAGVRVVKHGNRGVSSRSGSADVLEALGIPITLTPEEAAASVSSHNIAFLFAPGYHPAI 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_AQUAE (Anthranilate phosphoribosyltransferase OS=Aquifex aeolicus GN=trpD PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17
Identity = 51/132 (38.64%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  299 ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            A +A I A ++  + KGET  EI G  +   +   +V  +   + VD+VGTGGD ++T N+ST    + A  G KVAK             D LEALG  ++L PE V R ++E G GFM +  +HP MK V
Sbjct:   34 ATDAQIGALVMGTKMKGETPEEIEGAVKLFREKVVRVPVKDPEELVDVVGTGGDKSSTFNVSTVTGFVLAGAGVKVAKHGNRSVSSKSGSADFLEALGAKVELLPEKVARLIEEVGFGFMFAPLFHPAMKRV 165          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THETH (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  251 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E G GF+ +  +HP M+ V
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHV 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THET8 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpD PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  251 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E G GF+ +  +HP M+ V
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHV 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_THET2 (Anthranilate phosphoribosyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 56/148 (37.84%), Postives = 78/148 (52.70%), Query Frame = 2
Query:  251 LTEAEAQASLDYLL-NEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L E EA   +  L+  E      +  LV L  +GE   EI  +ARAM + A  +       +DIVGTGGDG   +N+ST A+++AAA G  VAK             D+LEALGV ++  PE V   ++E G GF+ +  +HP M+ V
Sbjct:   13 LEEEEAYEVMRALMAGEVSPVRAAGLLVALSLRGERPHEIAAMARAMREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGEAIEELGFGFLFARVFHPAMRHV 160          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_IDILO (Anthranilate phosphoribosyltransferase OS=Idiomarina loihiensis GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 2
Query:  224 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYATK-VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            +  L+S   LT+ + +     L+  E ++  +SA L+ ++ +GET  E+ G A A++  A   +      +D  GTGGDG+NT+NIST A+++AA+ G  VAK             DVLEAL + ++LDP      + + G  F+ +  YHP +K
Sbjct:    4 LQTLMSGESLTQDQTREFFQRLIKGELNDIQVSAALIAMKMRGETPAELAGAAEAILSAAKPFLRSDTTVIDSCGTGGDGSNTINISTTAALVAASMGLAVAKHGNRSVSSRSGSADVLEALKLRVNLDPSDASTQLADNGFCFLFAPHYHPGIK 158          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_HELPH (Anthranilate phosphoribosyltransferase OS=Helicobacter pylori (strain HPAG1) GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 2
Query:  218 ELIDCLISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMK 682
            E+++ L  + DL + E +     +++E      +   L  L+ KGE+F EI   A  ++++A K    G D +D  GTGGDG  T+N+ST A+++A++ G  +AK             D+LE LGV I+++P  +  C  +   GF+ +  YH   K
Sbjct:    3 EILNALYHQKDLNDEEVKKLFTLIIHEKVSPVQLGTILCALKIKGESFKEISVAATTLLEHAPKPFDSGLDLIDNCGTGGDGLKTINVSTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPTQLENCFKQTHFGFLFAPLYHQSFK 159          
BLAST of FC930835 vs. ExPASy Swiss-Prot
Match: TRPD_GLOVI (Anthranilate phosphoribosyltransferase OS=Gloeobacter violaceus GN=trpD PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16
Identity = 56/158 (35.44%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  221 LIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYATKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPCMKFV 688
            L+ C +    L+E  A+  ++ +L  E   AL  A LV +     T GE+  +A+ + + A     GL   +D  GTGGDG  T NIST  + +AAACG  VAK             DVLE LGV +  +   VR  +D  GI F+ +  +HP +K V
Sbjct:   10 LLICRLGGAALSEEAARELMEAWLAGEVPAALSGALLVAIAPLAITAGELAAMAKTLQEAAGAAPTGLPVLLDTCGTGGDGLGTFNISTAVAFVAAACGVPVAKHGARSASSRVGSADVLEHLGVHLSQERARVRAALDAVGITFLFAPGWHPALKAV 167          
The following BLAST results are available for this feature:
BLAST of FC930835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_DICTD5.888e-1738.89Anthranilate phosphoribosyltransferase OS=Dictyogl... [more]
TRPD_STRSV7.690e-1735.22Anthranilate phosphoribosyltransferase OS=Streptoc... [more]
TRPD_METHJ7.690e-1736.84Anthranilate phosphoribosyltransferase OS=Methanos... [more]
TRPD_AQUAE7.690e-1738.64Anthranilate phosphoribosyltransferase OS=Aquifex ... [more]
TRPD_THETH1.004e-1637.84Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET81.004e-1637.84Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_THET21.004e-1637.84Anthranilate phosphoribosyltransferase OS=Thermus ... [more]
TRPD_IDILO1.004e-1633.55Anthranilate phosphoribosyltransferase OS=Idiomari... [more]
TRPD_HELPH1.004e-1631.21Anthranilate phosphoribosyltransferase OS=Helicoba... [more]
TRPD_GLOVI1.004e-1635.44Anthranilate phosphoribosyltransferase OS=Gloeobac... [more]

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Properties
Property NameValue
Genbank descriptionC34109E09EF PostHarvP1 Citrus clementina cDNA clone C34109E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930835 ID=FC930835; Name=FC930835; organism=Citrus clementina; type=EST; length=693bp
GAACACAATGACAATGAGAGCGTTGTTGAATTTAACTGCAGTTTCTTCCT
CTCCATTTAATAATAATCACCCAAATCACCGGCCTTCCTTACCGTCGCTT
CGAAACTGTGGATTTACGACTGCGGGTAATAATCCGAGATGCAGAGAATT
AACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGATAATACTCGTCCTC
TAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGATAAGTCGAGTGGAT
TTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTATTTGTTGAATGAAGC
TGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCTCAGAGCCAAAGGAG
AAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGATGATAAAGTATGCT
ACGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATTGTGGGTACAGGAGG
TGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAATTCTTGCTG
CAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTAGTTCTTCT
GCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGTGTCGTTATTGACTT
GGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGCAGGAATTGGTTTCA
TGATGTCGACAAAGTATCACCCCTGCATGAAGTTTGTCAGGCC
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