FC930842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROMH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Proteus mirabilis (strain HI4320) GN=dxr PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN 620 K I++LGSTGSIGT TL ++ + D+F+V+AL AG N T +A Q + F+P+ + +E E+K+ LAN Sbjct: 2 KQITILGSTGSIGTSTLSVIENNPDEFQVLALVAGKNATKMAQQCRAFQPKYAVMSDEKSAGELKQLLAN 71
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_DESAP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulforudis audaxviator (strain MP104C) GN=dxr PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 3 Query: 408 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 PK I+VLGSTGSIG Q LD+V H +KF+VV LAAG N LLA+Q F P VV+V + + ++ L E PG Sbjct: 2 PKRIAVLGSTGSIGRQALDVVRSHPEKFKVVGLAAGRNWELLAEQAAEFAPGVVSVWSGDDAERVRVRLGGGVEVHAGEPG 82
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CLOPH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dxr PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.574e-11 Identity = 37/72 (51.39%), Postives = 54/72 (75.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 626 K ISVLGSTGSIGTQTL++V ++D +V ALAA SNITLL +Q++ F P++V V + E+K+ ++++E Sbjct: 2 KIISVLGSTGSIGTQTLEVVRNNKD-LKVSALAASSNITLLEEQIREFHPKLVCVYDREKALELKKRVSDLE 72
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CHLTE (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium tepidum GN=dxr PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.622e-11 Identity = 30/70 (42.86%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN 620 K +S+LGSTGSIG TLD+V H ++F + ALA G ++ +L Q+ F+P +V+VR+E+ + +K L + Sbjct: 2 KSLSILGSTGSIGLSTLDVVRRHPERFSIAALAEGHDVEMLLKQIDEFRPSLVSVRDEASRERLKGMLGD 71 HSP 2 Score: 21.557 bits (44), Expect = 1.622e-11 Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 629 KPEILAGEQGVIEAA 673 KPEIL G +G E A Sbjct: 73 KPEILCGLEGAAEVA 87
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PROMA (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus GN=dxr PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 423 VLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV--EESPRFWP 647 +LGSTGSIGTQTL+I E ++F+VVAL AG N+ LL Q++ +P+VVA+ + +L E++E L ++ +E P P Sbjct: 1 MLGSTGSIGTQTLEIAKECPEQFKVVALTAGRNLDLLIKQIQEHQPEVVALARKDILPELQERLNSLTGKERPNALP 77
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_BACFR (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides fragilis GN=dxr PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV 623 K I++LGSTGSIGTQ L ++ EH + + V AL A + + LL Q ++F P+ V + NE ++KEAL+++ Sbjct: 7 KQIAILGSTGSIGTQALQVIEEHPELYEVYALTANNKVDLLIAQARKFMPEAVVIANEEKYAQLKEALSDL 77
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_BACFN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=dxr PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.056e-11 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV 623 K I++LGSTGSIGTQ L ++ EH + + V AL A + + LL Q ++F P+ V + NE ++KEAL+++ Sbjct: 7 KQIAILGSTGSIGTQALQVIEEHPELYEVYALTANNKVDLLIAQARKFMPEAVVIANEEKYAQLKEALSDL 77
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_DESHY (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Desulfitobacterium hafniense (strain Y51) GN=dxr PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11 Identity = 31/72 (43.06%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVE 626 K +++LGSTGSIGTQTLDIV ++ ++ V ALAAG N+ + Q + FKP+++ + E E+K+ +A+++ Sbjct: 2 KRLTILGSTGSIGTQTLDIVRQNPEQLEVFALAAGKNVQEIELQAREFKPRIIGLMEEKAARELKQRVADLD 73
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CHLCH (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=dxr PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 + +S+LGSTGSIG TLD+V +H D+F +V LA G ++ LA Q++ FKP V+VR+ +++E L Sbjct: 2 RALSILGSTGSIGLSTLDVVRQHRDRFTIVGLAEGHDVAALAAQIEEFKPLAVSVRDAESAKKLQELL 69
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_LAWIP (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=dxr PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.728e-11 Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 3 Query: 408 PKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 P+ IS+LGSTGSIGT LD++ H++ F +VAL G N+ LLA Q ++KP +AV++E+ KEAL Sbjct: 18 PRTISILGSTGSIGTNALDVIKSHKELFHIVALGGGKNVQLLAKQAIQWKPDYLAVQDET----SKEAL 82 HSP 2 Score: 20.4014 bits (41), Expect = 2.728e-11 Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 2 Query: 629 KPEILAGEQGVIEAA 673 KP I G+QG ++ A Sbjct: 91 KPSIFVGQQGYVKLA 105 The following BLAST results are available for this feature:
BLAST of FC930842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930842 ID=FC930842; Name=FC930842; organism=Citrus clementina; type=EST; length=674bpback to top |