FC930842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_CHLPD (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dxr PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANVEESPRFWPG 650 + +S+LGSTGSIG TLD+V +H ++F + LA G ++ +L Q++ F P++V+VRN E+ L N E P + G Sbjct: 2 RSLSILGSTGSIGLSTLDVVRQHPEQFTITGLAEGHDVGMLVKQIREFNPRLVSVRNADAAAELASLLGN--EKPEIFYG 79
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_THETN (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Thermoanaerobacter tengcongensis GN=dxr PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 31/68 (45.59%), Postives = 50/68 (73.53%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEAL 614 K + +LGSTGSIG QTLD+V +++F +V L +N++LL+ Q+K F+P+VVAV++E +++E L Sbjct: 2 KKLIILGSTGSIGRQTLDVVRSLKEEFEIVGLTGYNNVSLLSKQIKEFRPKVVAVKDEEKARKLRENL 69
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PELPB (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dxr PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 29/70 (41.43%), Postives = 49/70 (70.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALAN 620 + +++LGSTGSIG TLD+V +H +KF++ LA G ++ LLA+Q+K F P V+VR+ + +++ L + Sbjct: 2 RSLAILGSTGSIGLSTLDVVRQHPEKFKIAGLAEGHDVALLAEQIKEFLPAAVSVRDADSVKKLQTLLGS 71
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_GEOSM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Geobacter sp. (strain M21) GN=dxr PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 31/55 (56.36%), Postives = 44/55 (80.00%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAV 575 K +++LGSTGSIG TLD+VA + D FRVVAL AG+N+ LL Q++ F+P++V+V Sbjct: 2 KNLTILGSTGSIGVSTLDVVAAYPDMFRVVALTAGNNLELLKTQIETFRPELVSV 56
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_RHOCS (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxr PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 372 AVTETFRKTWDGPKPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALA 617 +VT DG + ++VLGSTGS+G+ T++++ + +++R VAL A N+ LA Q +R +P+V V +E+ ++K+ALA Sbjct: 4 SVTPRHSTGGDGIRSVTVLGSTGSVGSNTVELIEAYPERYRTVALVARRNVAALAGQARRLRPEVAVVADEAHYADLKDALA 85
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PORGI (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Porphyromonas gingivalis GN=dxr PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV 623 K I++LGSTGSIGTQTLDI+ + D F V L A +N+ LL Q + ++P++V + N+ I+EALA++ Sbjct: 3 KNIAILGSTGSIGTQTLDIIHLNPDLFDVYLLTANNNVDLLIRQAREYRPEIVVIANDQKYHLIQEALADL 73
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_PORG3 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dxr PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 33/71 (46.48%), Postives = 49/71 (69.01%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNESLLDEIKEALANV 623 K I++LGSTGSIGTQTLDI+ + D F V L A +N+ LL Q + ++P++V + N+ I+EALA++ Sbjct: 3 KNIAILGSTGSIGTQTLDIIHLNPDLFDVYLLTANNNVDLLIRQAREYRPEIVVIANDQKYHLIQEALADL 73
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_BACSK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Bacillus clausii (strain KSM-K16) GN=dxr PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 30/56 (53.57%), Postives = 46/56 (82.14%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVR 578 K IS+LGSTGSIGTQTLD++ ++ D+F + ALA G+N+ L +Q+K F+P++V+V+ Sbjct: 2 KQISLLGSTGSIGTQTLDVIRDYPDQFTLSALACGTNLELCRNQIKEFQPKLVSVQ 57
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_ANASK (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaeromyxobacter sp. (strain K) GN=dxr PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 587 K +++LGSTGSIG Q LD+V D+F VV LAAG N L +Q++RF+P+VV+V +E+ Sbjct: 2 KRVAILGSTGSIGVQALDVVGRFPDRFEVVGLAAGRNAPRLLEQIRRFRPRVVSVCDEA 60
BLAST of FC930842 vs. ExPASy Swiss-Prot
Match: DXR_ANAD2 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=dxr PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11 Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 411 KPISVLGSTGSIGTQTLDIVAEHEDKFRVVALAAGSNITLLADQVKRFKPQVVAVRNES 587 K +++LGSTGSIG Q LD+V D+F VV LAAG N L +Q++RF+P+VV+V +E+ Sbjct: 2 KRVAILGSTGSIGVQALDVVGRFPDRFEVVGLAAGRNAPRLLEQIRRFRPRVVSVCDEA 60 The following BLAST results are available for this feature:
BLAST of FC930842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930842 ID=FC930842; Name=FC930842; organism=Citrus clementina; type=EST; length=674bpback to top |