FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C_LEICH (Protein phosphatase 2C OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.251e-23
Identity = 86/230 (37.39%), Postives = 122/230 (53.04%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTAS--TAVLVGN--HLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNR--------MLKQFVVAEPEIQ--DLEVDEGFELLVLASDGLWD-VVPNEDAVALAR 646
            RCG +   G R TMED +    ++  G     FGVFDGH   + ++YL+      + K    MTD ++   E   + D ++++S R+     GST +   A+  GN  HL V NVGDSR V    G  +PL+EDHKPN   ER+RIEN  G V      RV G LA+SRAFG+R         L+Q V+A  ++Q  D   D   + ++L  DG+++   PNE+ VA  +
Sbjct:   23 RCGSNCVNGYRETMEDAHLTYLTDSWG----FFGVFDGHVNDQCSQYLERAWRSAIEKESIPMTDERM--KELALRIDQEWMDSGRE----GGSTGTFFVALKEGNKVHLQVGNVGDSRVVACIDGVCVPLTEDHKPNNEGERQRIENCAGRV---ENNRVDGSLAVSRAFGDREYKLGSGSQLEQKVIALADVQHKDFTFDSN-DFVLLCCDGVFEGNFPNEEVVAYVK 238          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C1_YEAST (Protein phosphatase 2C homolog 1 OS=Saccharomyces cerevisiae GN=PTC1 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23
Identity = 78/241 (32.37%), Postives = 117/241 (48.55%), Query Frame = 2
Query:   32 RATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLF----ENLLKHP-----QFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVL--------------VGNH---LYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            R TMED +    +         F VFDGH G +A+++  +HL     +N+L          + D+ LAI E          E       + G TA+  VL              +  H   LY ANVGDSR V+ + G +I L+ DHK +   E +R+E AGG++M +   RV G+LA++R+ G++     VV  P    +E+    + L+LA DGLWDV+ ++DA  L +    P  AA+
Sbjct:   32 RRTMEDVHTYVKNFASRLDWGYFAVFDGHAGIQASKWCGKHLHTIIEQNILADETRDVRDVLNDSFLAIDE----------EINTKLVGNSGCTAAVCVLRWELPDSVSDDSMDLAQHQRKLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMKS---RVNGMLAVTRSLGDKFFDSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDACELIKDITEPNEAAK 259          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.242e-23
Identity = 76/229 (33.19%), Postives = 116/229 (50.66%), Query Frame = 2
Query:   23 RGKRATMEDFY----DIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKH--PQFMTDTKL---AISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAG---------------KAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            +G R TMED +    D    +        F ++DGHGG  AAEY ++HL +N++    P+ + D K    AI E +++TD   L+        DG+TA    ++G  + VAN GD++ V++++                KAI L+ +HK     ER RI+ AGG V   G  R+ G + +SRA G+R  K+  ++A P++   EV      ++L  DGLW V    DAV
Sbjct:   98 KGCRHTMEDAWVLLPDASMESPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVIAAGLPRELMDVKAAKKAIIEGFRRTDECLLQESTKGNWQDGATAVCVWVLGQTVVVANAGDAKAVLARSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNG--RLQGRIEVSRALGDRQFKKVGLIATPDVHSFEVTRKDHFIILGCDGLWGVFGPGDAV 324          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23
Identity = 86/241 (35.68%), Postives = 116/241 (48.13%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDG--QAVCMFGVFDGHGGSRAAEY----LKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALA----RTGERPEI 667
            R G S+ +G RA MED +    S + G      +F V DGHGG+RAA +    L  H+ + L   P      + A+   +   D + L S        G TA   ++    LY+A+ GDSR V+S+AG     +EDH+P R  ER+RI  AGG +      RV G LA+SRA G+   K         Q V AEPE+  L      E ++LASDG+WD V       L     R G  PE+
Sbjct:   66 RFGASAAQGWRARMEDAHCTWLS-LPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREALRRAFLSAD-ERLRSLWPRVETGGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIR---RRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPEL 301          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.235e-22
Identity = 86/267 (32.21%), Postives = 123/267 (46.07%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDV----------------------DFLE--------SERDTYRDD----------------GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            + G SS +G RA MED +     N+D +    FGVFDGHGG   A++  ++L   +L+   +   D   A+   + + D                         +E        S+ +  +DD                G TA  A++  N L VAN GDSR VIS+AG+A  LS DHKP    ER RI  AGG +      R+ G L ++RA G      N+ L   KQ V A P+I  +E+ +  + LVLA DG+WD + ++  V
Sbjct:   23 KLGLSSMQGWRANMEDAHSALL-NLDNET-SFFGVFDGHGGRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMG---RINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLV 284          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C1_SCHPO (Protein phosphatase 2C homolog 1 OS=Schizosaccharomyces pombe GN=ptc1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22
Identity = 77/228 (33.77%), Postives = 120/228 (52.63%), Query Frame = 2
Query:   32 RATMED----FYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLA--ISETYQQTDVDFLESERDTYRDD-GSTASTAVL------VGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGF-ELLVLASDGLWDVVPNEDAVALARTGERPEIAA 673
            R +MED     YD   +  DG       V+DGH G +A++Y +++L + LL+  +   D  +   + ET+ + +    ++   T+ D  G TA+ A            LY AN GD+R V+ + GKAI LS DHK +  +E +R+   GG+++     R+ GVLA++RA G+  LK+ V A P   +  +  G  E  ++A DGLWDVV +++AV   R    P  AA
Sbjct:   83 RRSMEDTHICLYDFGGNQDDG----FVAVYDGHAGIQASDYCQKNLHKVLLEKVRNEPDRLVTDLMDETFVEVNSKIAKA---THNDICGCTAAVAFFRYEKNRTRRVLYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQN---RINGVLAVTRALGDTYLKELVSAHPFTTETRIWNGHDEFFIIACDGLWDVVSDQEAVDFVRNFVSPREAA 300          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.613e-22
Identity = 87/296 (29.39%), Postives = 121/296 (40.88%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSN---VDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERD----------------------------------------TYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHK----------------------------------------PNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            G  S  G+   MED   ++ S    +DG  +  F VFDGHGG   +   +E +          + +  +A +   +Q     +E E +                                        T    GSTA  A+LV + L V+N GDSR V+ +AG  +PLS DHK                                        P+R DE+ RIE  GG V++    RV G+LAMSRA G++ LK  V+ EP+I         E L+LASDG+WDV+ NE A  +AR
Sbjct:  115 GSVSLAGRMRDMEDAVSLRPSFCTWLDGSPMHFFAVFDGHGGPHVSALCREQMHV-------IVAEEMVAEAAALRQRQPAAMEEEEEERAVAGGAVAELRPGGRAGGGGVRVRARHRAGVPCPLSGQTGAIIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLKPEVICEPDITITVRTVDDECLILASDGMWDVISNETASDVAR 403          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.594e-22
Identity = 86/266 (32.33%), Postives = 123/266 (46.24%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLK-------------HPQFMTDTKL-----------AISETYQQTDVDFLE--------SERDTYRDD----------------GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            G SS +G RATMED +     ++D      FGVFDGHGG   A++  ++L   +L+             H  F    ++           A+ +   Q     +E        S+ +   DD                GSTA  A++  + L VAN GDSR VIS+ G+A  LS DHKP    ER+RI  AGG +      RV G + +SRA G      N+ L   KQ + A P+I  +E+ +  + LVLA DG+WD + ++  V
Sbjct:   25 GLSSMQGWRATMEDAHSALL-DIDNDT-SFFGVFDGHGGRVVAKFCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMMRGQRGWRELQALGDKINQIS-GMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCGSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMG---RVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLV 284          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.694e-22
Identity = 83/274 (30.29%), Postives = 130/274 (47.45%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFY------DIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDVDFLESERD-----------------------------------------------TYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            R G SS +G RATMED +      D KTS         FGV+DGHGG   A++  ++L + ++ +  + T D + ++   + + D D ++ +R                                                T    G TA  A++    L+VAN GDSR VIS+  +A  LS+DHKP+   E++RI  AGG +  AG  R+ G L ++RA G      N+ L   KQ V A+P+I  +++ +  + LV+A DG+WD + +++ V
Sbjct:   23 RFGLSSMQGWRATMEDAHAAILDLDDKTS--------FFGVYDGHGGKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMD-DMMQGQRGWRELAVLGDKMNKFSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALIKDKKLFVANAGDSRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFI-HAG--RINGSLNLTRAIGDMEFKQNKFLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIWDCMSSQELV 284          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21
Identity = 82/233 (35.19%), Postives = 118/233 (50.64%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHL----FENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLK-QFVVAEPEIQDLEV---DEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAA 673
            G +S  GKR   ED +D      +   V  F V+DGHGG  AA++   H+     + L K     T   LA  E  +        S   T    G+TA+ A+L  G  L VA+VGDSR ++ + GK + L+ DH P R DE++RI+  GG V W   G   V G LAM+R+ G+  LK   V+AEPE + +++   D+ F  LVL +DG+  +V +++          P  AA
Sbjct:   96 GCASQIGKRKENEDRFDFAQLTDE---VLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSF--LVLTTDGINFMVNSQEICDFVNQCHDPNEAA 323          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PP2C_LEICH3.251e-2337.39Protein phosphatase 2C OS=Leishmania chagasi PE=2 ... [more]
PP2C1_YEAST7.242e-2332.37Protein phosphatase 2C homolog 1 OS=Saccharomyces ... [more]
P2C67_ORYSJ7.242e-2333.19Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]
PPMBL_HUMAN9.459e-2335.68Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C11_ORYSJ1.235e-2232.21Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
PP2C1_SCHPO1.613e-2233.77Protein phosphatase 2C homolog 1 OS=Schizosaccharo... [more]
P2C37_ORYSJ1.613e-2229.39Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C58_ORYSJ3.594e-2232.33Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C21_ARATH4.694e-2230.29Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
PPM1K_HUMAN1.784e-2135.19Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
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