FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21
Identity = 61/156 (39.10%), Postives = 91/156 (58.33%), Query Frame = 2
Query:  194 DTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            DT+ A  +  ++  V  +E + +   D G+TA  A++ G  L VAN GDSR V+S+AGKA+ +S DHKP    E  RI+NAGG V   G  RV G L +SRA G+   K         Q + A P+I+ L + +  E +V+A DG+W+V+ +++ V
Sbjct:  297 DTEEAEEDDDEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVV 450          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21
Identity = 84/246 (34.15%), Postives = 125/246 (50.81%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAE--------YLKEHLFEN------LLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLKQF-VVAEPEIQDLEV---DEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            + G S+  GKR   ED + +     D   +  F V+DGHGG+ AAE        Y+KE L E       L+K   F+   K      +   D   L          G+TA+ A+L  G  L VA+VGDSR ++ + GK   L+ DH P R +E+ RI+ +GG V W   G   V G LAM+R+ G+  LK   V+AEPE + +++   D+GF  LVL +DG+  +V +++   +      P+ AA+
Sbjct:   95 KVGCSTQLGKRKENEDRFKLARLTPD---ILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVK--AFLEINKAFARHAHLSVDASLLTC--------GTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGF--LVLTTDGINFIVNSQEICDIINQCHDPKEAAQ 325          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.043e-21
Identity = 75/265 (28.30%), Postives = 118/265 (44.53%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD----------------------------------DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVM----------WAGTWRVG-----GVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            SS +G    MED +     N+D      FGV+DGHGG+  A Y  +     L  H  + ++   A+   +   D D   S  D +R+                                  +GSTA   V+ G+ L V + GDSR V+S+ G+A  LS DHKP+   ER+R++NAGGV +          W    + G     G +++SR+ G+   K         Q +   P+I  +++ +  E LV+A++GLW  + N++ V
Sbjct:   74 SSMQGWGEKMEDAH-AAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDSNLSNAMRSAFYSMDEDLQLS--DAWRELVIPRNNGWMYFIKAGVCANLSPFPQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVV 335          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C05_ARATH (Probable protein phosphatase 2C 5 OS=Arabidopsis thaliana GN=At1g09160 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.974e-21
Identity = 73/235 (31.06%), Postives = 127/235 (54.04%), Query Frame = 2
Query:   44 EDFYDIKTS--NVDGQ---AVCMFGVFDGHGGSRAAEYLKEHLFENLLK-------HPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPL-SEDHK-PNRCDERKRIENAGGVV----MWAGTWRVG------GVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            ED++ IKT    V G    A  +FG+FDGH G+ AA Y KEHL EN++          +++     A+   + +TD++F +    +    G+T +  ++ G  + VA+VGDSR ++   G  + L + DH+     +ER+RI  +GG V    ++ G   VG      G L +SR+ G+  + +F+V  P ++ +++ +    L++ASDG+WD++ + D  A A  G   ++AA+
Sbjct:   46 EDYFLIKTDCERVPGDPSSAFSVFGIFDGHNGNSAAIYTKEHLLENVVSAIPQGASRDEWLQALPRALVAGFVKTDIEFQQKGETS----GTTVTFVIIDGWTITVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERITASGGEVGRLNVFGGN-EVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLPDAGGRLIIASDGIWDIL-SSDVAAKACRGLSADLAAK 274          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1K_MOUSE (Protein phosphatase 1K, mitochondrial OS=Mus musculus GN=Ppm1k PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 78/233 (33.48%), Postives = 119/233 (51.07%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLE----SERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLK-QFVVAEPE---IQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAA 673
            G +S  GKR   ED +         + V  F V+DGHGG  AA++   H+ + ++       D +  ++  + + D  F      S   +    G+TA+ A+L  G  L VA+VGDSR ++ + GK + L+ DH P R DE++RI+  GG V W   G   V G LAM+R+ G+  LK   V+AEPE   I+    D+ F  LVL +DG+  +V +++          P+ AA
Sbjct:   96 GCASLIGKRKENEDRFGFAQLT---EEVLYFAVYDGHGGPAAADFCHTHMEKCVMDLLPREKDLETVLTLAFLEIDKAFASYAHLSADASLLTSGTTATVALLRDGVELVVASVGDSRALLCRKGKPMKLTTDHTPERKDEKERIKKFGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKASGVIAEPETTRIKLYHADDSF--LVLTTDGINFMVNSQEICDFVNQCHDPKEAA 323          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1K_BOVIN (Protein phosphatase 1K, mitochondrial OS=Bos taurus GN=PPM1K PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 77/233 (33.05%), Postives = 120/233 (51.50%), Query Frame = 2
Query:    8 GYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLE----SERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLK-QFVVAEPEIQDLEV---DEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAA 673
            G +S  GKR   ED +       +   V  F V+DGHGG  AA++   H+ + +L       + +  ++  + + D  F      S   T    G+TA+ A+L  G  L +A+VGDSR ++ + GK + L+ DH P R DE++RI+  GG V W   G   V G LAM+R+ G+  LK   V+AEPE + +++   D+ F  LVL +DG+  +V +++          P  AA
Sbjct:   96 GSASQIGKRKENEDRFGFAQLTNE---VLYFAVYDGHGGPAAADFCHTHMEKCILDLLPKEENLETVLTLAFLEIDKTFARHAHLSADATLLTSGTTATVALLRDGIELVIASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSLGDLDLKTSGVIAEPETKRIKLHHADDSF--LVLTTDGINFMVNSQEICDFVNQCHDPNEAA 323          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2
Query:  215 ETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            E  ++  V  +E + +   D G+TA  A++ G  L VAN GDSR V+S+AGKA+ +S DHKP    E  RI+NAGG V   G  RV G L +SRA G+   K         Q + A P+I+ L + +  E +V+A DG+W+V+ +++ V
Sbjct:  308 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVV 454          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = 2
Query:  215 ETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            E  ++  V  +E + +   D G+TA  A++ G  L VAN GDSR V+S+AGKA+ +S DHKP    E  RI+NAGG V   G  RV G L +SRA G+   K         Q + A P+I+ L + +  E +V+A DG+W+V+ +++ V
Sbjct:  307 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVV 453          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.156e-20
Identity = 75/267 (28.09%), Postives = 115/267 (43.07%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRD---------------------------------DGSTASTAVLVGNHLYVANVGDSRTVISK-AGKAIPLSEDHKPNRCD-ERKRIENAGGVVMWAGTWRV---------------GGVLAMSRAFGNRMLKQ---------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVA 637
            SS +G    MED +    S  D  +   FGV+DGHGG+  A Y  +     L  H  +  D   A+   +   D +  +S  D +R+                                 +GSTA   V+ G+ + V + GDSR V+S+  G AI LS DHKP   + ER+R++NAGG+ +     +V               G  + +SR+ G+   KQ          ++ +P+I   ++    E LV+AS GLW  + + D VA
Sbjct:  133 SSMQGLGHKMEDAHAAILSLDDTTSTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYHNDLTNALDNVFFSMDENLQQS--DAWRELVIPRDNGWMYFLKAGVCANFWPFPQAYTGPAYEGSTACVVVIRGDQMIVGHAGDSRCVLSRQGGLAIDLSSDHKPRTSESERERVQNAGGISLGVDCEKVMENYVIKEQWILGYFGESVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDITGDMEFLVIASQGLWSCMESADVVA 397          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.972e-20
Identity = 81/268 (30.22%), Postives = 125/268 (46.64%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMT-DTKLAISETYQQTDVDFLESER-----------------------------------DTYR------------DDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            R G SS +G RA+MED +       D  +    GV+DGHGG   +++  ++L + +L    +   D   ++ + + + D + ++ +R                                   D +             + GSTA  AV+    L+VAN GDSR VIS+  +A  LS DHKP+   E++RI  AGG +  AG  RV G L +SRA G      N+ L   KQ V A P++  +E+ +  + LVLA DG+WD + ++  V
Sbjct:   23 RYGLSSMQGWRASMEDAHAAILDLDDNTS--FLGVYDGHGGKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMD-EMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFI-HAG--RVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLV 284          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PPM1G_MOUSE2.330e-2139.10Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PPM1K_XENLA3.043e-2134.15Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
P2C20_ORYSJ3.043e-2128.30Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C05_ARATH3.974e-2131.06Probable protein phosphatase 2C 5 OS=Arabidopsis t... [more]
PPM1K_MOUSE1.156e-2033.48Protein phosphatase 1K, mitochondrial OS=Mus muscu... [more]
PPM1K_BOVIN1.156e-2033.05Protein phosphatase 1K, mitochondrial OS=Bos tauru... [more]
PPM1G_MACFA1.156e-2039.60Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN1.156e-2039.60Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
P2C18_ORYSJ1.156e-2028.09Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]
P2C60_ARATH1.972e-2030.22Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
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