FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C19_ARATH (Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana GN=At2g20050 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17
Identity = 77/264 (29.17%), Postives = 122/264 (46.21%), Query Frame = 2
Query:    2 RCGYSSFRGKRATM-----EDFYDIKTSNVDGQAVCMFGVFDGHG--GSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGK----AIPLSEDHKPNRCDERKRIENAGGVVM---------------WAGT-----------WRVGGV---LAMSRAFGNRMLKQF-VVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIA 670
            RC + S RG          +D + I T          FGVFDGHG  G++ ++++K  L ENLL+H +F  D   A +  +  T+   L ++       G+TA T ++ G  +YVAN GDSR V+++       A+ LS D  P R DE +R++  G  V+               W GT           W   G+    A +R+ G+ + +   VVA PEI  +E+       V+ASDG+++ + ++  V +    + P  A
Sbjct:  107 RCSFLSQRGYYPDALDKANQDSFAIHTPFGSNSDDHFFGVFDGHGEFGAQCSQFVKRRLCENLLRHGRFRVDPAEACNSAFLTTNSQ-LHADLVDDSMSGTTAITVMVRGRTIYVANAGDSRAVLAEKRDGDLVAVDLSIDQTPFRPDELERVKLCGARVLTLDQIEGLKNPDVQCW-GTEEDDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIAVVELTPDNPFFVVASDGVFEFISSQTVVDMVAKHKDPRDA 368          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C19_ORYSJ (Probable protein phosphatase 2C 19 OS=Oryza sativa subsp. japonica GN=Os02g0599700 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16
Identity = 64/239 (26.78%), Postives = 100/239 (41.84%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESE--------------------------RDTYRD---DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNR---CDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            SS +G    MED +     N+D      FGV+DGHGG+  A Y  +     L  H  + ++   A+   +   D D   S+                          + TY +   +GSTA   V+ GN L V + GDSR V+S+ G+A  LS DHKP+R   C + +R+                               Q +   P+I  +++ +  E LV+A++GLW  + N++ V
Sbjct:  269 SSMQGWGEKMEDAH-AAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDSNLSNAMRSAFYSMDEDLQLSDAWRELVIPRNNGWMYFLKAAACTSICKATYTEPAYEGSTACVVVIRGNQLIVGHAGDSRCVLSRNGQASALSVDHKPDRDFACKKNERLPPE---------------------------DQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVV 479          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16
Identity = 68/238 (28.57%), Postives = 108/238 (45.38%), Query Frame = 2
Query:   80 GQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL-AISETYQQTDVDFLESERDTYRDDGSTASTAV--LVG----NHLYVANVGDSRTVISKAG------KAIPLSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQFVV-AEPEIQDLEVDEGFE--------------------LLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            G      GV+DGHGG  AA ++ + LF N+ ++           I+  +  T+ +FL   ++ ++     AS     LVG      LYVAN GDSR V+ K        KA+ LS +H  +    R+ +     ++   VV+    WRV G++ +SR+ G+  LK+     EP +    V E FE                     L+ ASDGLW+ + N++AV +  +  R  +A +
Sbjct:   79 GPEATFVGVYDGHGGPEAARFVNDRLFYNIKRYTSEQRGMSPDVITRGFVATEEEFLGLVQEQWKTKPQIASVGACCLVGIVCNGLLYVANAGDSRVVLGKVANPFKELKAVQLSTEHNASIESVREELRLLHPDDPNIVVLKHKVWRVKGIIQVSRSIGDAYLKRAEFNQEPLLPKFRVPERFEKPIMRAEPTITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNSCPRNGVARK 316          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16
Identity = 65/231 (28.14%), Postives = 101/231 (43.72%), Query Frame = 2
Query:  101 GVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL-AISETYQQTDVDFLE------SERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGK------AIPLSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            GV+DGHGG   A Y+ +HLF +L +            + + Y+ T+  F          +      GS     V+ G  LYVANVGDSR V+ +  K      A+ LS +H  +    RK +     E+   VV+    WRV G++ + R+ G+  LK+                      + +EP I    +    + L+ ASDGLW+ + N++AV +  +  R   A R
Sbjct:   83 GVYDGHGGPETACYINDHLFHHLKRFASEQNSISADVLKKAYEATEDGFFSVVTKQWPVKPQIAAVGSCCLVGVICGGILYVANVGDSRVVLGRHVKATGEVLAVQLSAEHNVSIESVRKELQSMHPEDRHIVVLKHNVWRVKGLIQVCRSIGDAYLKRSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHDQFLIFASDGLWEHLTNQEAVDIVHSSPRNGSARR 313          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C05_ORYSJ (Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16
Identity = 74/261 (28.35%), Postives = 122/261 (46.74%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNV-DGQAVCMFGVFDGHGGSRAAEYLKEHLFENLL-----------KHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDS-RTVISKAGKAIPLSEDHKPN-----RCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG--------NRMLKQ--------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            R G +  +G R  MED   ++  ++ DG +     VFDGH G  A E+L++ L++              K+   +TD+      T       +LE + D   + G+TA+   L  + L V+++GDS   V+S+ G+   ++  H+P        +E KRI  AGG   W    R+ G +++SRAFG        N ML +                     +V+ P++  +E+    E ++LA+DGLWD + + +AVAL R
Sbjct:   57 RWGTAKLQGARDEMEDEVVLRPGSLLDGFSFA--AVFDGHAGFSAVEFLRDELYKECAAALDGGAVLSTKNLDAITDSIQRAFATVDANLSTWLE-QMDKEDESGATATAMFLRNDVLVVSHIGDSCLQVVSRGGRPQAVTNFHRPYGNKKASLEEVKRIRAAGG---WIVDGRICGEISVSRAFGDIRFKTRKNEMLVKGVKEGRWTEKFISRINFKGDLIVSSPDVSLVELGPDVEFVLLATDGLWDYIKSSEAVALVR 311          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSJ (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 66/236 (27.97%), Postives = 109/236 (46.19%), Query Frame = 2
Query:   86 AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL-AISETYQQTDVDFLESERDTYRDD------GSTASTAVLVGNHLYVANVGDSRTVISK----AGKAIP--LSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            A  + GV+DGHGG+ A+ +L+  LF ++ +  +         I   +   + +FL+  R  +R        GS      + G+ LYVAN+GDSR V+ +     G A+   L+++H     + R+ +     ++A  VV   G WRV G++ +SR  G+  LK+                      + AEP IQ  ++      L+ ASDGLW+ + ++ AV +     R  IA R
Sbjct:   58 AATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVIRRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQVSRTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANR 293          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C34_ORYSI (Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 66/236 (27.97%), Postives = 109/236 (46.19%), Query Frame = 2
Query:   86 AVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL-AISETYQQTDVDFLESERDTYRDD------GSTASTAVLVGNHLYVANVGDSRTVISK----AGKAIP--LSEDHKPNRCDERKRI-----ENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            A  + GV+DGHGG+ A+ +L+  LF ++ +  +         I   +   + +FL+  R  +R        GS      + G+ LYVAN+GDSR V+ +     G A+   L+++H     + R+ +     ++A  VV   G WRV G++ +SR  G+  LK+                      + AEP IQ  ++      L+ ASDGLW+ + ++ AV +     R  IA R
Sbjct:   58 AATLVGVYDGHGGADASRFLRSRLFPHVQRFEKEQGGMSTEVIRRAFGAAEEEFLQQVRQAWRQRPKMAAVGSCCLLGAISGDTLYVANLGDSRAVLGRRVVGGGVAVAERLTDEHNAASEEVRRELTALNPDDAQIVVHARGAWRVKGIIQVSRTIGDVYLKKQEYSMDPVFRNVGPPIPLKRPALSAEPSIQVRKLKPNDLFLIFASDGLWEHLSDDAAVQIVFKNPRTGIANR 293          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C03_ORYSJ (Probable protein phosphatase 2C 3 OS=Oryza sativa subsp. japonica GN=Os01g0513100 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16
Identity = 61/213 (28.64%), Postives = 112/213 (52.58%), Query Frame = 2
Query:   95 MFGVFDGHGGSRAAEYLKEHLFENLLK-------HPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPL-SEDHK-PNRCDERKRIENAGGVV---MWAGTWRVG------GVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAARK 679
            +F V DGH G+ AA Y +++L  ++L          +++     A+   + +TD +F    + +    G+TA+  ++ G  + VA+VGDSR ++   G A+ L + DH+     +ER+R+  +GG V      G   +G      G L +SR+ G+  + +F+V  P ++ +++      L++ASDG+WD + +E A    R G   E+AA++
Sbjct:  124 VFAVLDGHNGNAAAIYTRDNLLNHVLSAMPRGLSREEWLHALPRALVAGFVKTDKEFQHKGQTS----GTTATFVIIDGWTITVASVGDSRCILDAQGGAVSLLTVDHRLEENVEERERVTASGGEVGRLSVVGGAEIGPLRCWPGGLCLSRSIGDIDVGEFIVPVPYVKQVKLSNAGGRLIIASDGIWDALSSEAAAKCCR-GLPAELAAKQ 331          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16
Identity = 65/245 (26.53%), Postives = 112/245 (45.71%), Query Frame = 2
Query:   65 TSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLK---HPQFMTDTKLAISETYQQTDVDFLESERDTYRDD------GSTASTAVLVGNHLYVANVGDSRTVISKAGK------AIPLSEDHKPNRCDERKRIE-----NAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQ---------------------FVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            +S+  G      GV+DGHGG   + ++ +H+F +L +     Q M+     I + +Q T+  FL    + ++        GS    +V+    LYVAN GDSR V+ +  +      A  LS +H  +    R+ ++     +   VV+    WRV G++ +SR+ G+  LK+                      + AEP I    ++   + ++ ASDGLW+ + N++AV + +   R  IA R
Sbjct:   71 SSHDSGPFGTFVGVYDGHGGPETSRFINDHMFHHLKRFTAEQQCMSSE--VIKKAFQATEEGFLSIVTNQFQTRPQIATVGSCCLVSVICDGKLYVANAGDSRAVLGQVMRVTGEAHATQLSAEHNASIESVRRELQALHPDHPDIVVLKHNVWRVKGIIQVSRSIGDVYLKRSEFNREPLYAKFRLRSPFSKPLLSAEPAITVHTLEPHDQFIICASDGLWEHMSNQEAVDIVQNHPRNGIAKR 313          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: YR307_MIMIV (PP2C-like domain-containing protein R307 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R307 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.463e-15
Identity = 43/118 (36.44%), Postives = 70/118 (59.32%), Query Frame = 2
Query:  314 HLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAG-------GVVMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            ++ V N+GD R V+ K G AIPL++DHKP   DE++RI+           +   AG WR+G  L++SR+FG+     +V   P++ D ++    E +++A DG+WDV+ N +A+   R
Sbjct:    8 NIQVINIGDCRAVLCKNGLAIPLNKDHKPIWPDEKRRIDRVNEKYETNEKIHFDAGDWRIGD-LSVSRSFGDLDNTPYVTHVPDLFDYQLQSDDEFIIMACDGVWDVLENHEAINFVR 124          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
P2C19_ARATH7.756e-1729.17Protein phosphatase 2C and cyclic nucleotide-bindi... [more]
P2C19_ORYSJ1.728e-1626.78Probable protein phosphatase 2C 19 OS=Oryza sativa... [more]
P2C48_ARATH2.947e-1628.57Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]
P2C60_ORYSJ3.849e-1628.14Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C05_ORYSJ3.849e-1628.35Probable protein phosphatase 2C 5 OS=Oryza sativa ... [more]
P2C34_ORYSJ5.027e-1627.97Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C34_ORYSI5.027e-1627.97Probable protein phosphatase 2C 34 OS=Oryza sativa... [more]
P2C03_ORYSJ5.027e-1628.64Probable protein phosphatase 2C 3 OS=Oryza sativa ... [more]
P2C64_ARATH8.575e-1626.53Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
YR307_MIMIV1.463e-1536.44PP2C-like domain-containing protein R307 OS=Acanth... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
back to top