FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.520e-39
Identity = 95/216 (43.98%), Postives = 135/216 (62.50%), Query Frame = 2
Query:   41 MEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAARK 679
            MED++  + +   G  + +F +FDGH G     YL+++LF N+L   +F+T    AI + Y++TD   L    D  +  GSTA TA+L+ G  L+VANVGDSR V+ K G+ I +S DH PN   ER  IEN GG V  M     RV G LA+SRAFG+R LK  + +EP+I+  ++D   ELLVLASDGLW V+ N++ V +A+  + P+ AA++
Sbjct:   49 MEDYHVAELAEEKGNELGLFAIFDGHLGDTVPAYLQKNLFANILNEEEFLTQPDRAIIKAYEKTDQAILSHTPDLGQG-GSTAVTAILLNGRKLWVANVGDSRAVLLKGGRPIQMSTDHDPN--VERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKRFKDPQAAAKQ 261          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38
Identity = 96/218 (44.04%), Postives = 129/218 (59.17%), Query Frame = 2
Query:   17 SFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQ--------QTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF--VVAEPEIQDLEVDE-GFELLVLASDGLWDVVPNEDAV 634
            S +G+R  MED +++ T   +     +FG+FDGHGG  AAEY+K  L E L +H Q     K     TYQ          D + LE    +Y + G+T   A+L    L VANVGDSR V+  K G AIPLS DHKP +  ERKRI+ AGG + + G+WRV G+LAMSR+ G+  LK    V+ +P+I   ++D+   E ++LASDGLWD   NE+AV
Sbjct:   97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLTYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAV 314          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 2
Query:    8 GYSSF--RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL---AISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV-MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            GYS +  RG+R  MED +   T+    +   +FGV+DGHGG +AAE+  ++L +N+++      D      A+   Y  TD  FL+ E       GS   TA++   +L V+N GD R V+S  G A  LS DH+P+R DERKRIE  GG V  + G WR+ G LA+SR  G+  LK++V+AEPE +   ++   E L+LASDGLWD V N++AV +AR
Sbjct:  139 GYSVYCKRGRREAMEDRFSAITNLHGDRKQAIFGVYDGHGGVKAAEFAAKNLDKNIVEEVVGKRDESEIAEAVKHGYLATDASFLKEEDVK---GGSCCVTALVNEGNLVVSNAGDCRAVMSVGGVAKALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFLILASDGLWDKVSNQEAVDIAR 354          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38
Identity = 95/218 (43.58%), Postives = 129/218 (59.17%), Query Frame = 2
Query:   17 SFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQ--------QTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF--VVAEPEIQDLEVDE-GFELLVLASDGLWDVVPNEDAV 634
            S +G+R  MED +++ T   +     +FG+FDGHGG  AAEY+K  L E L +H Q     K     +YQ          D + LE    +Y + G+T   A+L    L VANVGDSR V+  K G AIPLS DHKP +  ERKRI+ AGG + + G+WRV G+LAMSR+ G+  LK    V+ +P+I   ++D+   E ++LASDGLWD   NE+AV
Sbjct:   97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAV 314          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.103e-38
Identity = 92/219 (42.01%), Postives = 131/219 (59.82%), Query Frame = 2
Query:    8 GYSSF--RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKH---PQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV-MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            GYS +  RGKR  MED +   T+        +FGV+DGHGG  AAE+  ++L  N+L      +  +  + A+   Y  TD +FL+ +       GS   TA++   +L VAN GD R V+S  G A  L+ DH+P+R DER RIE++GG V  +   WR+ G LA+SR  G+  LKQ++++EPEI  L ++   E L+LASDGLWD V N++AV +AR
Sbjct:  122 GYSVYCKRGKREAMEDRFSAITNLQGDPKQAIFGVYDGHGGPTAAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFLKEKNVK---GGSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIAR 337          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37
Identity = 92/227 (40.53%), Postives = 139/227 (61.23%), Query Frame = 2
Query:    8 GYSSFRGKRA-TMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAAR 676
            G+   +GK +  MED+   +   ++G  + +F +FDGH G   A+YL+ +LF+N+LK   F TDT+ AI   Y+ TD   L+      +  GSTA T +L+ G  L VANVGDSR V+SK G A  LS DH+P++  E+K IE+ GG V  +     RV G LA++RAFG++ LK  + +EP+I    +D+  E ++ ASDG+W V+ N++AV   ++ + P  AA+
Sbjct:   37 GFHCVKGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGKG-GSTAVTGILIDGKKLVVANVGDSRAVMSKNGVAHQLSVDHEPSK--EKKEIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVLSNQEAVDAIKSIKDPHAAAK 260          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.360e-37
Identity = 89/228 (39.04%), Postives = 138/228 (60.53%), Query Frame = 2
Query:    8 GYSSFRGKRA-TMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLV-GNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMW--AGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERPEIAARK 679
            G+    GK    MED++  +        + +F +FDGH G     YLK +LF N+LK P F T+ + AI   Y+ T+   LE+ +      GSTA TA++V G  ++VANVGDSR V+ + G A  L+ DH+P+  +ER+RIE  GG V        RV G LA++RAFG++ LK  + +EP+++ + ++   E ++LASDGLW V+ N++AV L ++ + P+ AA++
Sbjct:   72 GFHLVEGKSGHDMEDYHVAEYKYDKSHELGLFAIFDGHLGDSVPSYLKANLFCNILKEPIFWTNPQEAIKNAYRSTNKYILENAKQL-GPGGSTAVTAIVVDGKDMWVANVGDSRAVVCERGAANQLTVDHEPHTTNERQRIEKQGGFVTTFPGDVPRVNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVKSIKDPQAAAKR 298          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.319e-37
Identity = 94/218 (43.12%), Postives = 128/218 (58.72%), Query Frame = 2
Query:   17 SFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQ--------QTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVI-SKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKQF--VVAEPEIQDLEVDE-GFELLVLASDGLWDVVPNEDAV 634
            S +G+R  MED +++     +     +FG+FDGHGG  AAEY+K  L E L +H Q     K     +YQ          D + LE    +Y + G+T   A+L    L VANVGDSR V+  K G AIPLS DHKP +  ERKRI+ AGG + + G+WRV G+LAMSR+ G+  LK    V+ +P+I   ++D+   E ++LASDGLWD   NE+AV
Sbjct:   97 SIQGRRDHMEDRFEVLMDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAV 314          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.166e-37
Identity = 94/218 (43.12%), Postives = 125/218 (57.34%), Query Frame = 2
Query:   23 RGKRATMEDFYDIKTSNVD--GQAVCMFGVFDGHGGSRAAEYLKEHLFENL------LKHPQFMTDTKLAISETYQQTDVDFL-ESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA-GTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            RG+R  MED Y       D  G     FGVFDGHGGS+AAE+   +L  N+       +  +     + AI E Y +TD DFL E  R      G+   TA++    L V+N GD R V+S+ G A  L+ DH P++ +E KRIE  GG V    G WR+ G LA+SR  G+R LK++V+AEPE + L +   FE L+LASDGLWD V N++AV + R
Sbjct:  135 RGRRGPMEDRYFAAVDRNDDGGYKNAFFGVFDGHGGSKAAEFAAMNLGNNIEAAMASARSGEDGCSMESAIREGYIKTDEDFLKEGSRG-----GACCVTALISKGELAVSNAGDCRAVMSRGGTAEALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVR 347          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36
Identity = 93/213 (43.66%), Postives = 124/213 (58.22%), Query Frame = 2
Query:    8 GYSSFRGKRA-TMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVG-NHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVV--MWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAV 634
            G+   +GK    MED+   K   VD   + +F +FDGH      +YL  HLFEN+LK P F  + + AI + Y  TD   L+ + D     GSTA TA+L+    L VANVGDSR VI + G A PLS DH+PN   E+  IEN GG V        RV G LA++RAFG++ LK  + +EP +    +D+  E L+LASDGLW V+ N++AV
Sbjct:   43 GFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKEPNFWQEPEKAIKKAYYITDTTILD-KADDLGKGGSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNM--EKDEIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAV 252          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
P2C41_ORYSJ5.520e-3943.98Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
PPM1L_MOUSE1.606e-3844.04Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
P2C25_ARATH1.606e-3842.47Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
PPM1L_HUMAN4.673e-3843.58Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
P2C02_ARATH6.103e-3842.01Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C58_ARATH1.360e-3740.53Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C44_ORYSJ1.360e-3739.04Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
PPM1L_BOVIN2.319e-3743.12Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
P2C30_ARATH5.166e-3743.12Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C39_ARATH1.963e-3643.66Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
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