FC930851

Overview
NameFC930851
Unique NameFC930851
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 82/237 (34.60%), Postives = 121/237 (51.05%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF--------MTDTKLAISETYQQTDVDF-LESERDTYRD-DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLE-VDEGFELLVLASDGLWDVVPNEDAVALART 649
            R G SS +G R  MED +        G +    F V+DGH GS+ A+Y  EHL +++  +  F        + + K  I   + + D    + SE+    D  GSTA   ++   H Y  N GDSR ++ +  K    ++DHKP+   E++RI+NAGG VM     RV G LA+SRA G+   K         Q V  EPE+ D+E  +E  + ++LA DG+WDV+ NE+     R+
Sbjct:   23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRS 256          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 82/237 (34.60%), Postives = 121/237 (51.05%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQF--------MTDTKLAISETYQQTDVDF-LESERDTYRD-DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLE-VDEGFELLVLASDGLWDVVPNEDAVALART 649
            R G SS +G R  MED +        G +    F V+DGH GS+ A+Y  EHL +++  +  F        + + K  I   + + D    + SE+    D  GSTA   ++   H Y  N GDSR ++ +  K    ++DHKP+   E++RI+NAGG VM     RV G LA+SRA G+   K         Q V  EPE+ D+E  +E  + ++LA DG+WDV+ NE+     R+
Sbjct:   23 RYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFRGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRS 256          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 88/259 (33.98%), Postives = 127/259 (49.03%), Query Frame = 2
Query:    2 RCGYSSF--RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESE--RDTYRD--------------------------DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFG------NRML---KQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGERP 661
            R  Y+S+  +G R  MED   ++  ++D      FGV+DGHGG+  A Y  +     LL+   ++ +   AI+    + D D   S   R++                             +GSTA   ++ GN + V NVGDSR V+SK G+AI LS DHKP+   ER+RI+ AGG V      R+ G+LA SRA G      NR +   +Q V   P+I+   + +  E LV+ASDG+WD + N + V   R   RP
Sbjct:   22 RVKYASYTTQGFRPHMEDALAVEL-DLDA-TTSFFGVYDGHGGAEVAMYCAKRFHTMLLEDVDYINNLPNAITSVCFRLDDDLQRSNEWRESLNPCANRNCLTNICANLHHFTEDYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVF---LQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRP 275          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25
Identity = 84/254 (33.07%), Postives = 125/254 (49.21%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFY---DIKTSNVDGQAVC-----MFGVFDGHGGSRAAEYLKEH---LFENLLKHPQ-------FMTDTKLAISETYQQTDVDFLESERDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGER----PEIAARK 679
            R G  +  G R  MED +   D  + ++    +C      +GVFDGHGG  AA Y+K H   LF    + PQ       F    + +I   +   D+  L  +    R  G+TA  A++ G  L VAN GD R V+ + G A+ +S DH+P    E +RI   GG +       + GVL+++RA G+  +K        ++AEPE Q   + E  E L++  DG+WDV+ ++ AV + R G R    PE  AR+
Sbjct:   69 RSGSFADIGPRRYMEDEHIRIDDLSGHLGSLLMCPAPNAFYGVFDGHGGPDAAAYMKRHAIRLFFEDSEFPQALEEDESFYESVEKSIHNAFLSADLA-LADDLAISRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGVAVEMSRDHRPTYDAEHERITECGGYI---EDGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIWDVMSSQHAVTIVRKGLRRHDDPERCARE 318          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25
Identity = 82/234 (35.04%), Postives = 115/234 (49.15%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTK--LAISETYQQTDVD----FLESE---------RDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 628
            R G SS +G R  MED +        G +    F V+DGH GSR A Y   HL E++  +  F    K   A+  + +         FL+ +         R+     GSTA   ++   H+Y  N GDSR V+ + G+    ++DHKP    E++RI+NAGG VM     RV G LA+SRA G+   K         Q V  EPE+ ++   E  E +VLA DG+WDV+ NE+
Sbjct:   23 RYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEE 253          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25
Identity = 82/256 (32.03%), Postives = 125/256 (48.83%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQA-VCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKLAISETYQQTDVDFLESE----------------RDTYRD------------------DGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWA-GTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALAR 646
            S+ +G R+TMED +     N+D       FGV+DGHGGS  A Y   HL   +L+   F ++   A+ +++ + D + L ++                R   R                   +G TA   ++    + V N GD+R VIS+ G+AI LS DHKPN  +E +RI  AGG V ++ G+ RV   +A+SRA G+         R  +Q +   PEI+  ++ +  E LV+A DG+WDV+ N+  V   R
Sbjct:   30 SAMQGYRSTMEDAH-ATIENLDALTNTSFFGVYDGHGGSAVARYCANHLHNKVLEQEDFSSNLANALRQSFFRMD-EMLRNQAASKELTEYGSGNEYWRTAGRSWLRCAPCVLGPVYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVR 283          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25
Identity = 81/234 (34.62%), Postives = 112/234 (47.86%), Query Frame = 2
Query:    2 RCGYSSFRGKRATMEDFYDIKTSNVDG-QAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDTKL------AISETYQQTDVDFLESE---------RDTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 628
            R G SS +G R  MED +        G      F V+DGH GSR A Y   HL E++  +  F    K       ++          FL+ +         R+     GSTA   ++   H+Y  N GDSR V+ + G+    ++DHKP    E++RI+NAGG VM     RV G LA+SRA G+   K         Q V  EPE+ ++   E  E +VLA DG+WDV+ NE+
Sbjct:   23 RYGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEE 253          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 76/233 (32.62%), Postives = 125/233 (53.65%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALART 649
            S  +G R TMED +  +   V  Q V +FGVFDGHGG   A+++++H  + LLK+  F     + A+ ET+ + D   +  E        + T  D+   G TA+ A++  N LYVAN GDSR+V+ +      +S DHKP+  +E+ RIE AGG V      RV G L +SRA G+         R  +Q ++A P+++  E+    + +++  DG+++ + +++ +    T
Sbjct:   27 SEMQGWRNTMEDAHIHRPDIV--QDVSVFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEDALKETFLKMDELLMTPEGAKELNNYKATDTDESYAGCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNHQELLKHVNT 254          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24
Identity = 75/226 (33.19%), Postives = 123/226 (54.42%), Query Frame = 2
Query:   14 SSFRGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTDVDFLESE--------RDTYRDD---GSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGN---------RMLKQFVVAEPEIQDLEVDEGFELLVLASDGLWDVVPNED 628
            S  +G R TMED +  +   +  Q V +FGVFDGHGG   A+++++H  + LLK+  F     + A+ ET+ + D   L  E        + T  D+   G TA+ A++  N LYVAN GDSR+V+ +      +S DHKP+  +E+ RIE AGG V      RV G L +SRA G+         R  +Q ++A P+++  E+    + +++  DG+++ + +++
Sbjct:   27 SEMQGWRNTMEDAHIHRPDII--QDVSVFGVFDGHGGREVAQFVEKHFVDELLKNKNFKEQKFEEALKETFLKMDELLLTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRSVLCRNNTNHDMSVDHKPDNPEEKSRIERAGGFV---SDGRVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVFETLNHQE 247          
BLAST of FC930851 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24
Identity = 77/217 (35.48%), Postives = 119/217 (54.84%), Query Frame = 2
Query:   23 RGKRATMEDFYDIKTSNVDGQAVCMFGVFDGHGGSRAAEYLKEHLFENLLKHPQFMTDT-KLAISETYQQTD--------VDFLESER---DTYRDDGSTASTAVLVGNHLYVANVGDSRTVISKAGKAIPLSEDHKPNRCDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLK---------QFVVAEPEIQDLEVDEGFELLVLASDGLWD 610
            +G R TMED + I   N++   V +F VFDGHGGS  A + + H  E L+K+  +     + A++ET+ + D        +D L   R   D     G TA+ A++VG  LYVAN GDSR+ +++ GK   +S+DHKP+   E+KRIE AGG V      RV G L++SRA G+   K         Q + A P+++  ++    + L++  DG+++
Sbjct:   30 QGWRNTMEDAH-ISDLNIEPD-VHLFAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGLDELNKIRGVTDEASLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIERAGGFV---SDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFE 241          
The following BLAST results are available for this feature:
BLAST of FC930851 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
PPM1A_RABIT2.659e-2534.60Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE2.659e-2534.60Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
P2C21_ORYSJ2.659e-2533.98Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
P2C02_ORYSJ2.659e-2533.07Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
PPM1B_RAT3.473e-2535.04Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
P2C42_ORYSJ4.536e-2532.03Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
PPM1B_MOUSE7.738e-2534.62Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PP2C3_PARTE1.011e-2432.62Probable protein phosphatase 2C 3 OS=Paramecium te... [more]
PP2C1_PARTE1.011e-2433.19Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
PP2C6_PARTE1.724e-2435.48Probable protein phosphatase 2C 6 OS=Paramecium te... [more]

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Properties
Property NameValue
Genbank descriptionC34109G02EF PostHarvP1 Citrus clementina cDNA clone C34109G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930851 ID=FC930851; Name=FC930851; organism=Citrus clementina; type=EST; length=694bp
GAGATGTGGATACTCAAGTTTTAGGGGAAAGAGGGCAACTATGGAGGATT
TCTATGACATTAAAACTTCCAATGTTGATGGGCAAGCTGTCTGCATGTTT
GGAGTCTTTGATGGTCATGGTGGTTCCCGTGCGGCTGAGTATTTGAAGGA
GCACCTCTTTGAGAATCTCTTGAAGCATCCACAATTTATGACAGACACCA
AATTGGCTATAAGTGAAACATATCAACAGACTGATGTCGACTTTTTGGAA
TCTGAAAGAGATACTTACAGGGATGATGGTTCTACTGCTTCAACGGCTGT
ATTGGTTGGTAACCATCTATATGTTGCCAATGTCGGAGATTCTAGGACTG
TAATATCCAAGGCTGGTAAAGCAATTCCTCTTTCTGAGGATCATAAACCC
AACAGATGTGATGAGCGGAAGAGAATTGAAAATGCCGGAGGCGTTGTAAT
GTGGGCAGGCACTTGGAGAGTAGGAGGTGTGCTAGCTATGTCTCGTGCTT
TTGGTAACCGCATGCTGAAGCAATTTGTCGTTGCGGAACCTGAGATCCAG
GACCTTGAAGTAGATGAAGGATTTGAGCTGCTTGTGCTTGCAAGTGATGG
ACTATGGGATGTAGTACCCAATGAGGATGCTGTTGCACTTGCCCGAACAG
GGGAAAGACCTGAAATCGCAGCTCGGAAGTAACGGAGACTGCTT
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