FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 43/139 (30.94%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPD-KEILKMVARTTL 642 NINA + + + ++T LGP+G K++V G ++ DG T+LK + + +P A + A +QD GDGTTS + E +KQ + ++EG+HP++++ F A + + ++ V D+ + + +L+ A T L Sbjct: 25 NINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKDIAVSVKKEDKDEQRSLLEKCAATAL 163
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16 Identity = 46/131 (35.11%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 256 DVLKTNLGPKGTIKMLVGGAGDI-KLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEG-MHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 D++K+ LGPKG K+L + + +T DG T+LK + + NP A ++ + QDD GDGTTS + EL++++E+ ID+ +HP+ +++G+ +A A L L K +E L +A+TTL Sbjct: 31 DLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTL 161
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16 Identity = 45/140 (32.14%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 NINA + D ++T LGP+G K++ + ++ DG T++K + I +P A + A +QD GDGTTS VI GE +K ++ ++EG+HP++++ F A Q +++ V + E +E L+ A T++ + Sbjct: 28 NINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELS--VDIKPENMREFLEKCASTSMNS 165
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 46/162 (28.40%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 157 NRTMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 ++T ++ VL + + NINA +Q+ LK LGP G+ ++V ++ DG T+LK + + +P A + + AQD GDGTTS I GELMK+++ ++EG+ +++ G+ A ++ + + + +E+L+ ART + Sbjct: 5 SQTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAM 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_ENCCU (T-complex protein 1 subunit epsilon OS=Encephalitozoon cuniculi GN=CCT5 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 46/139 (33.09%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI-QNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 NI + + L T+LGP G K+L DI +T DG T+LKEM++ +NP + +I + + +QD+ GDGTTS V+ L+ Q++ + +G+HP + +GFE+ ++ L + + KE + A+T+L Sbjct: 33 NIGVVRSIATFLSTSLGPTGMDKILQSKDEDIVVTNDGATILKEMEMTENPISRLIVQLSESQDEEIGDGTTSVVVLASALLDQAQALLGQGVHPIKISEGFEVGLGHAVEHLSEISEEI----SDLKETMMKAAKTSL 167
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPQ_SCHPO (Probable T-complex protein 1 subunit theta OS=Schizosaccharomyces pombe GN=cct8 PE=2 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15 Identity = 43/148 (29.05%), Postives = 78/148 (52.70%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 A+ N NA + L ++ +T+LGP G K++V LT D T+++E+++ +P A ++ Q++ GD V+F GEL+ ++E I G+ P + G+E+A T++ LE+ + E +KE++K + Y N Sbjct: 27 AVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELIKAIRTCISSKQYGN 174
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15 Identity = 47/143 (32.87%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 241 AKGLQDVLKTNLGPKGTIKMLVGGAGDIKL--TKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNH 663 A + D++K+ LGPKG K+L+ D L T DG T+LK + + NP A ++ + QDD GDGTTS + EL++++E I + +HP+ ++ G+ A +A Q L + ++ L +A TTL + H Sbjct: 32 AIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 174
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPQ_DICDI (T-complex protein 1 subunit theta OS=Dictyostelium discoideum GN=cct8 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 42/149 (28.19%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 208 KSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSY 654 K A+ NI+A K L ++ +T+LGP G KM++ + +T D T+++E+ + +P A M+ A Q+ GDGT V GE ++++ ++ G+HP ++ GFE A + +E + KE+ K + Y Sbjct: 18 KDEAILRNIDATKQLSEITRTSLGPNGMNKMIINHLEKLFVTNDAATIIRELDVIHPAAKMLVMAAQMQEQEMGDGTNYVVTLTGEFLQKAATLLEMGLHPSEIITGFEKAGAKLQEIIESMIVYNLKDITDKKEVTKCLKSAIASKQY 166
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 241 AKGLQDVLKTNLGPKGTIKMLVGGAGDIKL--TKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNH 663 A + D++K+ LGPKG K+L+ D L T DG T+LK + + NP A ++ + QDD GDGTTS + EL++++E I + +HP+ ++ G+ A +A + L + ++ L +A TTL + H Sbjct: 32 AIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 174
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 7.321e-15 Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 1 Query: 241 AKGLQDVLKTNLGPKGTIKMLVGGAGDIKL--TKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNH 663 A + D++K+ LGPKG K+L+ D L T DG T+LK + + NP A ++ + QDD GDGTTS + EL++++E I + +HP+ ++ G+ A +A + L + ++ L +A TTL + H Sbjct: 32 AIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 174 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |