FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH603_FRASC (60 kDa chaperonin 3 OS=Frankia sp. (strain CcI3) GN=groL3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 220 LHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIM----IARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPV 585 L +NA L D +K LGPKG ++ G +T DG T+ +E+Q++NP A M + A + +GDGTT+ + L+++ +D G +P L +G E A A L+ EK++ V Sbjct: 15 LEAGVNA---LADAVKVTLGPKGRNAVIEKLTGPPTITNDGVTIAREIQLRNPFANMGAQLVKEVATKTNGTAGDGTTTATVLAQALVREGLHAVDGGANPMFLKNGIEAAVAALLEEFEKYRGEV 137
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH601_RHOPA (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris GN=groL1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 38/121 (31.40%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 250 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 600 L + +K LGPKG ++ G ++TKDG T+ KE++++ N A M+ A +D++GDGTT+ + ++++ + + GM+P L G EIA A ++ ++K PV E Sbjct: 23 LANAVKVTLGPKGRNVLIEKSFGAPRITKDGVTVAKEVELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIEIAVAAVVKDIQKRAKPVASSAE 143
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 39/149 (26.17%), Postives = 74/149 (49.66%), Query Frame = 1 Query: 151 RRNRTMSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT----AIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPV 585 R+NR + + + +A+ N L D++ LGPKG +L G K+ DG T+ KE+++++P A ++ + A +D++GDGTT++V+ L+ + + + G +P ++ G E +A + L+K V Sbjct: 39 RKNRNVKVSAMAKELHFNKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAELKKMSKEV 187
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH602_RHOPB (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 39/121 (32.23%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 250 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 600 L + +K LGPKG ++ G ++TKDG T+ KE++++ N A M+ A +D++GDGTT+ + ++++ + + GM+P L G EIA A ++ L K PV E Sbjct: 23 LANAVKVTLGPKGRNVLIERSFGAARITKDGVTVAKEIELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIEIAVAAVIKDLVKRAKPVASSAE 143
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH601_RHOP2 (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain HaA2) GN=groL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 38/121 (31.40%), Postives = 67/121 (55.37%), Query Frame = 1 Query: 250 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI----QNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 600 L + +K LGPKG ++ G ++TKDG T+ KE+++ +N A M+ A +D++GDGTT+ + ++++ + + GM+P L G EIA +A ++ ++K PV E Sbjct: 23 LANAVKVTLGPKGRNVLIEKSFGAPRITKDGVTVAKEIELDDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLRRGIEIAVQAVVKDIQKRARPVASSAE 143
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 39/121 (32.23%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 250 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 600 L D +K LGPKG ++ G + TKDG T+ KE++++ N A M+ A +D +GDGTT+ + ++++ + + GM+P L G EIA R ++ + K V DE Sbjct: 22 LADAVKVTLGPKGRNVVIEKSFGSPRTTKDGVTVAKEIELEDKFENMGAQMVKEVASKTNDTAGDGTTTATVLTQAIVREGAKSVAAGMNPMDLKRGIEIAVRTAVEDITKRSKKVKSNDE 142
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH601_CHRVO (60 kDa chaperonin 1 OS=Chromobacterium violaceum GN=groL1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 38/127 (29.92%), Postives = 65/127 (51.18%), Query Frame = 1 Query: 232 INAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT----AIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 600 +N L D +K LGPKG +L G +TKDG ++ KE+++++P A M+ A D++GDGTT+ + ++++ + + GM+P L G + A A ++ L+ PV E Sbjct: 17 VNGVNVLADAVKVTLGPKGRNVLLARSFGAPHITKDGVSVAKEIELKDPFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVQEGMKYVASGMNPMDLKRGIDKAVHAVIKELQTLSKPVTNSKE 143
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH602_RHILO (60 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 43/139 (30.94%), Postives = 68/139 (48.92%), Query Frame = 1 Query: 196 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE 600 EV S A + L D +K LGPKG ++ G ++TKDG T+ KE++++ N A M+ A D++GDGTT+ + ++K+ + + GM+P L G + A A +Q L+ V DE Sbjct: 5 EVKFHSDAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDLAGDGTTTATVLAQAIVKEGAKAVASGMNPMDLKRGIDKAVEAIVQELKTNARKVTRNDE 143
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH60_NITEC (60 kDa chaperonin OS=Nitrosomonas eutropha (strain C91) GN=groL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 44/133 (33.08%), Postives = 65/133 (48.87%), Query Frame = 1 Query: 196 EVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQI----QNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTP 582 EV AA I L D +K LGPKG +L G +TKDG ++ KE+++ +N A M+ A D +GDGTT+ + ++K+ R + GM+P L G E A A ++ L+K P Sbjct: 5 EVRFGDAARSAVITGVNVLADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTSDTAGDGTTTATVLAQAIVKEGMRYVAAGMNPMDLKRGIEKAVSAAVEELKKLSKP 137
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: CH601_MESSB (60 kDa chaperonin 1 OS=Mesorhizobium sp. (strain BNC1) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 42/141 (29.79%), Postives = 72/141 (51.06%), Query Frame = 1 Query: 250 LQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQ----NPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDE----------PDKEILKMVA 630 L D +K LGPKG +L G ++TKDG T+ KE++++ N A M+ A +DI+GDGTT+ + ++++ + + GM+P L G ++A + +L K + +E +KEI +M+A Sbjct: 23 LADAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVQEGAKAVAAGMNPMDLKRGVDLAVAEVVDYLAKAAKKIKTSEEVAQVGTISANGEKEIGQMIA 163 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |