FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.965e-24 Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A MNI AA+ + + ++T LGPKG KMLV GDI +T DG T+L EM IQ+P A M+ A QD +GDGTT+ V+ GEL+K++E +D+ +HP +++ G+ +A + L+ V DE E+L A T + Sbjct: 24 AQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILDSIAKEVKPDDE---EVLLKAAMTAI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L EM IQ+P A M+ A QD +GDGTT+ V+ GEL+K++E +D+ +HP +++ G+ +A + LE V D E LK A T++ Sbjct: 24 AQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILEGIAKEV---SPDDVETLKKAAVTSI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24 Identity = 53/146 (36.30%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ GDGTTS +I GE++ +E +++ MHP V++ + +A + L+K TPV D ++E++ + +++ T + W Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKKISTPV---DVNNREMMLSIINSSITTKVISRW 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24 Identity = 57/144 (39.58%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRT 648 AL +NI A K +++ LK+ GP+G KMLV GDI +T DG T+L +M +Q+P A ++ + A QD+ + DGT + VI GEL+K++E + + +HP ++V GF+ A+ L+ +E+ V + D +ILK VA T+L + Sbjct: 31 ALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQKVSVN---DMDILKKVAMTSLNS 171
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24 Identity = 55/149 (36.91%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGD---EPDKEILKMVARTTLRTSY 654 AL NI AA L ++LK++LGP+G KML+ GD+ +T DG T++KEM+IQ+P A ++ A AQD GDGTTS V+ G L+ ++E +++ +HP +++DG++ A L+ +++ + + D K LK + TT+ + + Sbjct: 20 ALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEIIDQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKF 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 56/146 (38.36%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI+AAK + D ++T+LGPKG KM+ G GD+ +T DG T+LK+MQ+ +P A M+ + AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A L+ L PV + D+E L A T+L + + + Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLS---DRETLLNSATTSLNSKVVSQY 179
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23 Identity = 56/146 (38.36%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI+AAK + D ++T+LGPKG KM+ G GD+ +T DG T+LK+MQ+ +P A M+ + AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A L+ L PV + D+E L A T+L + + + Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLS---DRETLLNSATTSLNSKVVSQY 179
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 57/155 (36.77%), Postives = 93/155 (60.00%), Query Frame = 1 Query: 178 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 VL N + A MNI A + + + +++ LGPKG KMLV GDI +T DG T+LKEM +++P A M+ A Q+ GDGTT+ V+ GEL++++E +D+ +HP +++ G+++A + + L++ V DKEIL +A T++ Sbjct: 9 VLPENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIAMDV---KADDKEILHKIAMTSI 160
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 52/146 (35.62%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ GDGTTS +I GE++ +E +++ MHP V++ + +A + L+K TPV D +++++ + +++ T + W Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMVSTLKKISTPV---DVNNRDMMLNIINSSITTKVISRW 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 109.383 bits (272), Expect = 1.922e-23 Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI+AAK + D ++T+LGPKG KM+ G GD+ +T DG T+LK+MQ+ +P A M+ + AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A ++ L PV + D+E L A T+L + + + Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELS---DRETLLNSATTSLNSKVASQY 179 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |