FC930852
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 53/142 (37.32%), Postives = 88/142 (61.97%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI AA+ + + ++T LGPKG KMLV GDI +T DG T+L ++ +Q+P A M+ A QD +GDGTT+ V+ GEL++++E +D+ +HP +++ G+ +A + LE+ V + D+E L +A T++ Sbjct: 24 AQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILEEIAIKV---NPDDEETLLRIAMTSI 162
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.304e-23 Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A +NI A K L + ++T LGPKG KMLV GDI +T DG T+L+EM I +P A M+ A Q+D GDGTT+ VI GEL+K++E+ I+ G+HP ++ G+ A + LE+ + + D++ L VA T + Sbjct: 23 AQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEE-----ISMEASDRDTLMKVAITAM 159
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 9.539e-23 Identity = 54/146 (36.99%), Postives = 86/146 (58.90%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NI+AAK + D ++T+LGPKG KM+ G GD+ +T DG T+LK+MQ+ +P A M+ + AQD +GDGTTS VI G L+ + + +G+HP ++ + F+ A ++ L P + D+E L A T+L + + + Sbjct: 40 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPEELS---DRETLLNSAATSLNSKVVSQY 182
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 52/146 (35.62%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ GDGTTS +I GE++ +E +++ MHP V++ + A + L+K PV D D +++ + +++ T + W Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMVEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPV---DINDSDMMLNIINSSITTKAISRW 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 52/146 (35.62%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 229 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 NINAAK + D+++T LGPK +KML+ G I +T DGN +L+E+Q+Q+P A + + QD+ GDGTTS +I GE++ +E +++ MHP V++ + A + L+K PV D D +++ + +++ T + W Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPV---DISDSDMMLNIINSSITTKAISRW 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 AL +I AAK + + ++T+LGP G KM+V GD+ +T DG T+L M + + A ++ + +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A R +Q L+K V++ D + E L A+TTL + N Sbjct: 33 ALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLV-DINNPEPLIQTAKTTLGSKVIN 179
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.246e-22 Identity = 55/140 (39.29%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 223 HMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 + NI+AAK + D ++T+LGPKG KM+ GD+ +T DG T+LK+MQ+ +P+A M+ + AQD +GDGTTS V+ G L+ R + G+HP ++ + F+ A ++ L PV +G D+E L A T+L Sbjct: 32 YSNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLG---DRETLLNSATTSL 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTL 642 A MNI A K L + ++T LGPKG KMLV GDI +T DG T+LKEM I++P A M+ A Q+D GDGTT+ VI GEL+K++E ++ +HP ++ G+ A + L+ + D D++ L VA T + Sbjct: 23 AQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILDD-----IAIDASDRDTLMKVAMTAM 159
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 55/163 (33.74%), Postives = 92/163 (56.44%), Query Frame = 1 Query: 178 VLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTNHW 666 +LN NA+ A NI AA+ + D+++T LGPK +KML+ G I LT DGN +L+E+ + +P A + A AQD+ GDGTTS +I GE++ E ++ +HP V+V + A ++ E + P+ + +E D L+ + + + T +++ W Sbjct: 9 ILNQNAKREQGRKAQTANIKAARAVSDIVRTTLGPKSMLKMLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSAVESFLERDIHPTVIVGAYFQALEEIVRLTESYGEPIDIENEND---LQKIVSSCIGTKFSSKW 168
BLAST of FC930852 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.627e-22 Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 217 ALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDGFEIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLRTSYTN 660 AL +I AAK + + ++T+LGP G KM+V GD+ +T DG T+L M + + A ++ + +QDD GDGTT V+ G L++++E+ +D G+HP + DG+E A R +Q L+K V++ D + E L A+TTL + N Sbjct: 33 ALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDNVLV-DINNPEPLIQTAKTTLGSKVVN 179 The following BLAST results are available for this feature:
BLAST of FC930852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930852 ID=FC930852; Name=FC930852; organism=Citrus clementina; type=EST; length=697bpback to top |