FC930860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 64/181 (35.36%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659 +A +AEF + L+F++ + + + TD AS P G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R++LY IAQ LG++ L+K G +++ + LS G S + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 42 RAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVK----GFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 217
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 66/179 (36.87%), Postives = 96/179 (53.63%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGA 698 +A AEFF+ L +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+I Y +AQLLG+V +L T AL++ GVS A + EI +T V ++AT + + G LG++A +A+GF + L G + GA Sbjct: 11 RAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGA 181
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21 Identity = 66/179 (36.87%), Postives = 96/179 (53.63%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGA 698 +A AEFF+ L +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+I Y +AQLLG+V +L T AL++ GVS A + EI +T V ++AT + + G LG++A +A+GF + L G + GA Sbjct: 11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGA 181
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21 Identity = 62/177 (35.03%), Postives = 98/177 (55.37%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659 +A +AEF + L+F++ + + + TD AS P G++ + A +F+ V A +SGGH+NPAVTFG F+ ++L+R++LY +AQ LG++ L+K A LS+G S + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 37 RAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 212
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21 Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAV---SVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAF---ALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDG 695 +A +AEF +M++F+F GS + F +T A + ++ AF L +A SVG +ISG H+NPAVT G + I++LR+I+Y IAQ +G++VA ++L T L ++ AL+ GV+S + EI+ T LV V AT ++ +LG P+AIGF V L + G Sbjct: 12 RAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVG-HISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRRDLGDSGPLAIGFSVALGHLLAIDYTG 191
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 69/178 (38.76%), Postives = 99/178 (55.62%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTD----GGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKF--ST-----GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659 +A +AEF + L+F++ + + F TD GGA GL+ S A +F+ V A ISGGH+NPAVTFG F+ ++L+R++ Y +AQ LG+ L+K ST GG A LS G + V EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 38 RAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGG---GANMLSDGYNVGVGVGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFSV 211
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 65/181 (35.91%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETS--------AFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659 +A +AEF + L+F++ + + + TD AS G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R+ILY +AQ LG+V L+K G ++S A L++G S + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 36 RAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVK----GFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 211
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 66/179 (36.87%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGA 698 +A AEFF+ L +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+I Y AQLLG+V +L T AL++ GVS A EI +T V ++AT + + G LG++A +A+GF + L G + GA Sbjct: 11 RAIFAEFFATLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGA 181
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20 Identity = 62/175 (35.43%), Postives = 96/175 (54.86%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGAS----TPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659 +A +AEF + L+F++ + + + TD + T G++ + A +F+ V A ISGGH+NPAVTFG + +TL+R+++Y +AQ LG++ L+K T A LS G S V EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 38 RALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 211
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.006e-20 Identity = 63/181 (34.81%), Postives = 101/181 (55.80%), Query Frame = 3 Query: 171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFA--------LSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659 +A +AEF + L+F++ + + + +D +T G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R++LY IAQ LG++ L+K G ++S +A LS G S + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 41 RAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVK----GFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHIPVLAPLPIGFAV 216 The following BLAST results are available for this feature:
BLAST of FC930860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930860 ID=FC930860; Name=FC930860; organism=Citrus clementina; type=EST; length=703bpback to top |