FC930860

Overview
NameFC930860
Unique NameFC930860
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.295e-16
Identity = 62/181 (34.25%), Postives = 97/181 (53.59%), Query Frame = 3
Query:  141 PGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659
            PGE       +A +AEF +  +F++    + M  SK +   A+   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++L R+I Y + Q LG++    ++K F  G   G    A  ++SG +  + +  EIV TF LVYTV+ +A D K+     ++  +AP+ IGF V
Sbjct:   45 PGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAV 222          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 60/181 (33.15%), Postives = 97/181 (53.59%), Query Frame = 3
Query:  141 PGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLETS---AFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659
            PGE       +A +AEF +  +F++    + M   +  +  AS   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y + Q LG++    ++K F  G  +T+   A  ++ G +  + +  EIV TF LVYTV+ +A D K+     ++  +AP+ IGF V
Sbjct:   43 PGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 220          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 63/181 (34.81%), Postives = 96/181 (53.04%), Query Frame = 3
Query:  141 PGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTG---GLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659
            PGE       +A +AEF +  +F++    + M  SK T   A+   G+   + +    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y I Q LG+V    ++K F  G   G    A  ++ G +  + +  EIV TF LVYTV+ +A D K+     ++  +AP+ IGF V
Sbjct:   45 PGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAV 222          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP8_RAT (Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = 3
Query:  144 GEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFAL-SSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGA 698
            G + +   ++  + E     +F+F G  S +  S  T        GL+  +LAH  AL + ++   NISGGH NPAV+    + G +  +  I YW++QL G ++   L K  +          +AFA+         A+  EIVMT  LV  V   AV+ K   +G +AP +IGF V  +ILAGG   GA
Sbjct:   29 GMSWYEQYIQPCVVELLGSALFIFIGCLSVIENSPNT--------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTLVGGLKTMLLIPYWVSQLFGGMIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGVEIVMTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGGISGA 209          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16
Identity = 58/182 (31.87%), Postives = 91/182 (50.00%), Query Frame = 3
Query:  168 LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGAS 701
            LKA  AEF + LIFVF G GS + +        S    ++  +LA   A+         +SGGH+NPA+T    VG  I+LLR+  Y  AQL+G++    +L +    L      +  AL++  +   A+V E+++TF L   ++A+    +   +G+ A ++IG  V    L G  F G S
Sbjct:   11 LKAVFAEFLATLIFVFFGLGSALKWP-------SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL-YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCS 183          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 3
Query:  141 PGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLK-FSTGGLET---SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPIAIGFIV 659
            PGE S     +A +AEF +  +F++    + M   +  +  AS   G+   + A    +F  V   A ISGGH+NPAVTFG F+   ++L R++ Y I Q LG++    ++K F     +T    A  ++ G +  + +  EI+ TF LVYTV+ +A D K+     ++  +AP+ IGF V
Sbjct:   43 PGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAV 220          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP8_MOUSE (Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 62/183 (33.88%), Postives = 91/183 (49.73%), Query Frame = 3
Query:  168 LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFAL-SSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGA 698
            ++  + E     +F+F G  S +  S  T        GL+  +LAH  AL + ++   NISGGH NPAV+    V G +  +  I YWI+QL G ++   L K  +          +AFA+         A+  EI++T  LV  V   AV+ K   +G +AP +IGF V  +ILAGG+  GA
Sbjct:   35 VQPCIVELVGSALFIFIGCLSVIENSPNT--------GLLQPALAHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNASGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEK--TMGPLAPFSIGFSVIVDILAGGSISGA 207          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 56/182 (30.77%), Postives = 93/182 (51.10%), Query Frame = 3
Query:  171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKF-----STGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGAS 701
            KA  AEF + LIFVF G GS + +        S    ++  S+A   A+         +SGGH+NPA+T    +G  I+LLR++ Y  AQL+G++    +L +     + G L  +  AL++  +   A+V E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G S
Sbjct:   12 KAVFAEFLATLIFVFFGLGSALKWP-------SALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLAVN--ALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCS 183          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 57/181 (31.49%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  168 LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVV-ACLLLKFSTGGL--ETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGAS 701
            LKA  AEF + LIFVF G  S + +        S    ++  +LA   A+         +SGGH+NPA+T    VG  I+LLR++ Y +AQL+G++  A +L   + G      +  +L++  +   AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G S
Sbjct:   11 LKAVFAEFLATLIFVFFGLASALKWP-------SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCS 183          
BLAST of FC930860 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.914e-16
Identity = 60/184 (32.61%), Postives = 97/184 (52.72%), Query Frame = 3
Query:  171 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGA--NISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFST-----GGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPIAIGFIVGANILAGGAFDGAS 701
            KA  AEF +MLIFV    GS + +     GG+  P  +    ++  F L +A  V    +ISGGH+NPAVT        I++ +S+ Y  AQ LG+++   +L   T     GGL  +   +   +++ + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GAS
Sbjct:   39 KAVTAEFLAMLIFVLLSVGSTINW-----GGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVT--TVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGAS 214          
The following BLAST results are available for this feature:
BLAST of FC930860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
PIP11_ORYSJ2.295e-1634.25Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP15_ARATH2.997e-1633.15Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP12_MAIZE2.997e-1634.81Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
AQP8_RAT2.997e-1632.98Aquaporin-8 OS=Rattus norvegicus GN=Aqp8 PE=2 SV=1[more]
AQP5_HUMAN2.997e-1631.87Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
PIP14_ARATH3.914e-1633.15Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
AQP8_MOUSE3.914e-1633.88Aquaporin-8 OS=Mus musculus GN=Aqp8 PE=2 SV=1[more]
AQP5_RAT3.914e-1630.77Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_PIG3.914e-1631.49Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP4_NOTAL3.914e-1632.61Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34109G11EF PostHarvP1 Citrus clementina cDNA clone C34109G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930860 ID=FC930860; Name=FC930860; organism=Citrus clementina; type=EST; length=703bp
GACAAACCGCTACGCAATATAAAACGGAGCACAAAACAGAGCCAGCAAGC
TTGTAAGAAGCCTTTTGAGCTAAAACAAAATCGTTTTTCTTGACAAAATT
TTCGATAAAAATGCCAATCTACAGAATTGCCATCGGCACGCCGGGAGAGG
CAAGCCATCCTGATGCGTTAAAGGCGGCTCTAGCTGAGTTTTTCTCGATG
CTTATTTTTGTTTTCGCCGGCCAGGGATCCGGGATGGCCTTTAGCAAGCT
AACGGATGGCGGGGCGTCCACGCCGGCCGGTCTTATATCTGCATCACTGG
CTCATGCATTTGCCCTATTTGTGGCTGTTTCAGTTGGTGCAAATATTTCT
GGGGGTCACGTGAACCCAGCTGTGACATTTGGTGCATTTGTTGGAGGCCA
CATTACATTGTTGAGGAGCATCCTGTATTGGATTGCACAGTTGCTAGGAT
CAGTTGTTGCTTGCTTGCTGCTCAAGTTTTCCACCGGTGGATTGGAAACA
TCGGCATTCGCACTATCATCTGGCGTCTCATCATGGAATGCAGTTGTGTT
TGAGATTGTGATGACCTTTGGCTTGGTCTACACAGTGTATGCAACAGCAG
TGGATCCAAAGAAGGGAAATCTGGGCACTATTGCACCAATTGCAATCGGT
TTCATTGTTGGTGCCAACATTTTGGCTGGTGGCGCTTTTGATGGTGCATC
AAT
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