FC930866

Overview
NameFC930866
Unique NameFC930866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930866 vs. ExPASy Swiss-Prot
Match: YFH9_SCHPO (Uncharacterized RNA-binding protein C23A1.09 OS=Schizosaccharomyces pombe GN=SPAC23A1.09 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.054e-22
Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 3 
Query:  306 PQRSIEGWIILVTGVHEEAQEDDLQNVFGEYGEIRNLHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGGELLTQTLTVDWAFSNGPSTGP 584
            P +S+EG+II+VTGVH EA E+ ++++F ++G ++NLHLNLDRRTG+VKGYALIEY   E+AQ A+   N   LL + L VD+AF   P   P
Sbjct:    3 PAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALIEYATLEQAQKAVDEKN-LSLLDEKLEVDFAFLEPPERAP 94
The following BLAST results are available for this feature:
BLAST of FC930866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YFH9_SCHPO2.054e-2253.76Uncharacterized RNA-binding protein C23A1.09 OS=Sc... [more]

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Properties
Property NameValue
Genbank descriptionC34109H05EF PostHarvP1 Citrus clementina cDNA clone C34109H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930866 ID=FC930866; Name=FC930866; organism=Citrus clementina; type=EST; length=688bp
AAAACGCAAGACGCAGGCAAATCTCAAATCCCTAAAAGTTCGAAAAAAAC
ACAACAAAAATGGCGAACGCAGAAGTGGACGCGCTCGACTTCGAGGACGA
CGACTTGATGGACGAGGACGGGACTGCCGACGTCGATGCATCCTCTTCCC
CGCGGGCCCCGCAGCCCAAGCTTAAGTCCGCCATCACTGGTGGCGCACCT
AAGAAGACCAAAGGACGCGGTTTTCGTGAAGAAGCCGACTCCGAGCGACA
TAGCCGGCTCGCTGATCGTCATTTTGAGTCTCTTGGCACCGATGGGGGAC
CGGGTCCCCAACGATCTATTGAGGGATGGATAATTTTGGTTACTGGTGTG
CATGAAGAGGCACAAGAAGATGATTTACAAAATGTATTTGGTGAATATGG
GGAGATCAGAAACTTGCATTTGAATCTTGATCGTCGTACAGGTTTTGTGA
AGGGGTATGCGCTGATTGAATATGAGAATTTTGAGGAAGCACAGAATGCC
ATAACTGCAATGAATGGAGGTGAACTTCTTACACAGACCCTGACTGTTGA
TTGGGCCTTCAGCAATGGGCCTAGTACTGGACCCTTNCAAAGAAAGAACA
TGAGGCCTGGACGGACACATCGCTCAAGGAGTCCCAGGAGAAGATACTGA
TGCCGAGCGAGGACAAATGGTTATTTCAATATGGGTTT
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