FC930867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18 Identity = 65/198 (32.83%), Postives = 90/198 (45.45%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQ 695 + + ++ A ++ R ++++AVSKTKPV I + +AG R FGENYVQE V+K + LEWHFIG LQSNK + L+A F V ++ EKIA RL+ + PL+VL+QVNTSGE SKSG+EP L + S+ Sbjct: 8 IEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTR-----------------LVAEHF--------------------------------DWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELISR 155
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17 Identity = 61/191 (31.94%), Postives = 88/191 (46.07%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKH 686 L V++R+ +A ER+ R + +++ SKT P VIR+ Y G + +GEN VQE ++K L D DLEWHFIG LQ+NKVK L+G + LD K+ A + A ++V + VL++VN GEE+K GVEP EL ++ Sbjct: 7 LSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKVVLIHSLDRKN-------------------------------LADEIQKRAFKNNIVQD-------------------VLIEVNVGGEETKGGVEPENLKELFEY 147
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.419e-16 Identity = 59/161 (36.65%), Postives = 78/161 (48.45%), Query Frame = 3 Query: 177 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEESKSGV 653 +I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA LPDD++WHFIG LQ+NK K L A VPNL VE++ + K A +LN R P+ VQ+NTS E+ KSG+ Sbjct: 41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKDL-----------------------------------------------AKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGL 154
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16 Identity = 67/201 (33.33%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRI 707 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSN KS L+A F +C ++ +IA RLN PL VL+Q+N S E SKSG++ + EL ++ R+ Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSN-----------------KSRLVAEHF---------------------DWC-----------HTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRL 158
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16 Identity = 67/201 (33.33%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRI 707 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSN KS L+A F +C ++ +IA RLN PL VL+Q+N S E SKSG++ + EL ++ R+ Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSN-----------------KSRLVAEHF---------------------DWC-----------HTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRL 158
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16 Identity = 67/201 (33.33%), Postives = 89/201 (44.28%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRI 707 L V ++ AA R R P+ I ++AVSKTKP S I + +AG R FGENYVQE V+K + LEWHFIG LQSN KS L+A F +C ++ +IA RLN PL VL+Q+N S E SKSG++ + EL ++ R+ Sbjct: 8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSN-----------------KSRLVAEHF---------------------DWC-----------HTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRL 158
BLAST of FC930867 vs. ExPASy Swiss-Prot
Match: PROSC_CAEEL (Proline synthetase co-transcribed bacterial homolog protein OS=Caenorhabditis elegans GN=F09E5.8 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.492e-15 Identity = 65/205 (31.71%), Postives = 89/205 (43.41%), Query Frame = 3 Query: 117 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLGDIHGQPFLD*KSNLIASAFCVAQLYLTFMRE*NMMSDLKLIYCFAAGVPNLAMVESVVNEKIAGRLNRMVETMGR--KPLKVLVQVNTSGEESKSGVEPSGCLELVKHXSQTVRILSF 716 L ++I+ V A +S+ R R+VAVSKTK +I Y R FGENYVQE+ EK+ L D+ WHFIG +QSNK+ + P L VE+V EK A ++ G PL+VLVQVNTSGE++K G+E +L + + + L F Sbjct: 10 LFNIIEAVADAVT-ASQATKRCRLVAVSKTKSADLIEACYSQNQRHFGENYVQELEEKSDVLASKCLDIRWHFIGQVQSNKIGKICNS-----------------------------------------------PGLWCVETVETEKHARIFDKEWSKHGANLSPLRVLVQVNTSGEDNKGGIEIGEAPKLAEFIRKECQNLKF 166 The following BLAST results are available for this feature:
BLAST of FC930867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930867 ID=FC930867; Name=FC930867; organism=Citrus clementina; type=EST; length=726bpback to top |