FC930875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37 Identity = 89/195 (45.64%), Postives = 113/195 (57.95%), Query Frame = 2 Query: 119 RIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 ++ +G GEAS PD + L E +FVF G G+ M T G ST G L + +L A + V + G +ISGGHVNPAVT VGGH+TL RS LY AQ+L S AC LL++ TGGL T AL+ GV VV E V TF L++ +YAT +DP+K L P+ G +VGAN +AG GASM Sbjct: 3 KLTLGHRGEASEPDFFRGVLGELVLTFLFVFIGVGAAMTDGATTKG--STAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASM 194
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.383e-37 Identity = 86/189 (45.50%), Postives = 118/189 (62.43%), Query Frame = 2 Query: 143 EASHPDA--LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 EA PD ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S +AC+LL++ +GG+ T AL +G+ +V E+++TF L++ YA +DP + + TI P+ G IVGAN LAGG F GASM Sbjct: 16 EAPAPDVGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASM 203
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37 Identity = 85/198 (42.93%), Postives = 113/198 (57.07%), Query Frame = 2 Query: 107 MPIYRIAIGTPGEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 +P+ ++ +G GEA P L+A E +FVF G S + K GGA A + +A++A A + V + G ++SGGH+NPAVT VGGHITL RS LY AQL GS +ACLLL+ TGG T AL+ GV V E V TF L+ + AT +DP++ P+ G +VGAN +AGG GASM Sbjct: 4 LPMTKLELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGKAA-GGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASM 200
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.862e-37 Identity = 83/180 (46.11%), Postives = 112/180 (62.22%), Query Frame = 2 Query: 164 LKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 ++A LAE +FVF G + MA G + P A L + ++AHA A V V+ G ++SGGH+NPAVT G V GHIT LR++LY AQLL S AC+LL+F +GG+ T AL G+S +V E+++TF L++ YA +DP + + I P+ G IVGAN LAGG F GASM Sbjct: 23 VRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASM 201
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.529e-36 Identity = 84/188 (44.68%), Postives = 110/188 (58.51%), Query Frame = 2 Query: 140 GEASHPDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP-AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 GE ++A LAE +FVF G + MA GA+ P A L ++A A A V V+ G ++SGGH+NPAVT GHIT RS LY AQLL S +AC+LL++ TGG+ T L SG+ +V EI++TF L++ VYAT +DP+ G P+ G IVGAN +AGG F GASM Sbjct: 11 GEVVDAGCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDPRSSVPG-FGPLLTGLIVGANTIAGGNFSGASM 197
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.163e-34 Identity = 77/181 (42.54%), Postives = 113/181 (62.43%), Query Frame = 2 Query: 158 DALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 +AL+ ++EF S FV A GS M+ KL G S P G++ ++A+A AL +V + N+SGGHVNPAVTF V G I++ ++ YW +Q++ SV+ACL+LK + + ++ ++ + A V E V+ F LVYTV+ TA DP++G + PI IGF+ GAN+LA G F G SM Sbjct: 20 NALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSM 199
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 7.101e-34 Identity = 78/190 (41.05%), Postives = 113/190 (59.47%), Query Frame = 2 Query: 155 PDALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG--------TIAPICIGFIVGANILAGGRFDGASM 700 P AL+A AEFFS +FVF GS ++ LT S + L++ ++A AF LF AV + A++SGGHVNPAVTF +GGHIT+ +I YW +Q+LGS ACL+L + + G ++ ++ + A + E V+TF +VYTV+ A DP+ G G + + +G + GA +LA G GASM Sbjct: 14 PPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASM 202
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.613e-28 Identity = 71/190 (37.37%), Postives = 105/190 (55.26%), Query Frame = 2 Query: 161 ALKAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAG-LISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLG---------TIAPICIGFIVGANILAGGRFDGASM 700 +L++ LAEF S +FVF GS ++ LT ++ AG L++ ++A AF LF AV + A++SGGHVNPAVTF +GG I + ++ YW +QLLG+ ACL L + G E ++ ++ + V E V+TF LVYTV+ + G + + +G GA +LA G GASM Sbjct: 18 SLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASM 207
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 63/177 (35.59%), Postives = 99/177 (55.93%), Query Frame = 2 Query: 167 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTP------AGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLET----SAFALSSGVSSWNAVVFEIVMTFGLVYTVYATAVDPKK----GNLGTIAPICIGFIV 655 +A +AEF + L+F++ + + + TD AS P G++ + A +F+ V A ISGGH+NPAVTFG F+ ++L+R++LY AQ LG++ L+K G A +S+G S+ + EI+ TF LVYTV+ +A DPK+ ++ +AP+ IGF V Sbjct: 41 RAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAV 216
BLAST of FC930875 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 66/181 (36.46%), Postives = 96/181 (53.04%), Query Frame = 2 Query: 167 KAALAEFFSMLIFVFAGQGSGMAFSKLTDGGASTPAGLISASLAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGHITLLRSILYWIAQLLGSVVACLLLKFSTGGLETSAFALSS---GVSSWNAVVFEIVMTFGLVYTVYATAVDPKKGNLGTIAPICIGFIVGANILAGGRFDGASM 700 +A AEFF+ L +VF G G+ + + A P ++ +LA AL V +ISG HVNPAVTF VG ++LLR+I Y +AQLLG+V +L T AL++ GVS A + EI +T V ++AT + + G LG++A + +GF + L G + GA M Sbjct: 11 RAICAEFFASLFYVFFGLGASLRW-------APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGM 183 The following BLAST results are available for this feature:
BLAST of FC930875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 152
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930875 ID=FC930875; Name=FC930875; organism=Citrus clementina; type=EST; length=700bpback to top |