FC930876 | Citrus Genome Database

Overview


Name	FC930876
Unique Name	FC930876
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	698

Libraries


Library Name	Type
PostHarvP1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig9336	contig	Ccv1_Contig9336:120..816.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

HSP 2 Score: 95.9005 bits (237), Expect = 2.199e-19
Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL L+GG
Sbjct:    1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

HSP 3 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +D ++ +K K+ +KEGIPP QQRLIFAGKQ+ D +T ADY +   S LHLVL LRGG
Sbjct:   18 EPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19
Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 1

Query:  184 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 408
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DY I+  S LHLVL LRGG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77

HSP 2 Score: 95.5153 bits (236), Expect = 2.872e-19
Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 1

Query:  412 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGGM 636
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DY I+  S LHLVL L+GG+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77

HSP 3 Score: 78.9518 bits (193), Expect = 2.782e-14
Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 180
            E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T  DY I+  S LHLVL LRGG+
Sbjct:   18 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL L+GG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:   18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL L+GG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:   18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL L+GG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:   18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL L+GG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:   18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18
Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL L+GG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I   S LHLVL LRGG
Sbjct:   18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18
Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T  DY I+  S LHLVL LRGG
Sbjct:    1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76

HSP 2 Score: 91.6633 bits (226), Expect = 4.147e-18
Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T  DY I+  S LHLVL L+GG
Sbjct:    1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76

HSP 3 Score: 75.8702 bits (185), Expect = 2.355e-13
Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +DT+D +K ++ ++EGIPP QQRLI+ GKQL D +T  DY I+  S LHLVL LRGG
Sbjct:   18 EMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405
            M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP  QR+++ GKQL D  T   YN+++ S LHLVL LRGG
Sbjct:    1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76

HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17
Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633
            M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP  QR+++ GKQL D  T   YN+++ S LHLVL L+GG
Sbjct:    1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76

HSP 3 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177
            E +DTI+ +K +I +KEGIPP  QR+++ GKQL D  T   YN+++ S LHLVL LRGG
Sbjct:   18 ELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76

[Close]

BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17
Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1

Query:  178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 408
            M I VKTLTGK I ++++ +D I  +K ++++KEGIPP QQRLIF GKQ+ D +  ++Y+I+  S LHLVL LRGG+
Sbjct:    1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77

HSP 2 Score: 88.5817 bits (218), Expect = 3.511e-17
Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 1

Query:  406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGGM 636
            M I VKTLTGK I ++++ +D I  +K ++++KEGIPP QQRLIF GKQ+ D +  ++Y+I+  S LHLVL L+GG+
Sbjct:    1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77

HSP 3 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 1

Query:    1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 180
            + +D I  +K ++ +KEGIPP QQRLIF GKQ+ D +  ++Y+I+  S LHLVL LRGG+
Sbjct:   18 DPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77

The following BLAST results are available for this feature:

BLAST of FC930876 vs. ExPASy Swiss-Prot

BLAST of FC930876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
NEDD8_CAEEL	9.871e-20	60.53	NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1	[more]
RUB2_ARATH	1.289e-19	61.33	NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN...	[more]
NEDD8_RAT	1.425e-18	56.58	NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1	[more]
NEDD8_RABIT	1.425e-18	56.58	NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1	[more]
NEDD8_MOUSE	1.425e-18	56.58	NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2	[more]
NEDD8_HUMAN	1.425e-18	56.58	NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1	[more]
NEDD8_BOVIN	1.425e-18	56.58	NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1	[more]
RUB3_ORYSJ	1.862e-18	53.95	NEDD8-like protein RUB3 OS=Oryza sativa subsp. jap...	[more]
RUB3_ARATH	1.207e-17	55.26	NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DICDI	1.576e-17	53.25	NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	C34110A03EF PostHarvP1 Citrus clementina cDNA clone C34110A03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930876 ID=FC930876; Name=FC930876; organism=Citrus clementina; type=EST; length=698bp
GAGAGCTCCGACACCATCGACAACGTCAAGGCCAAGATCCGAGACAAGGA
AGGAATCCCTCCGGACCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCG
AAGACGGCCGCACCTTGGCCGATTACAATATCCAAAAGGAATCGACGCTT
CATCTGGTGCTTCGTCTCCGTGGAGGCATGCAGATCTTCGTGAAAACCCT
AACCGGCAAGACCATTACTCTCGAAGTTGAGAGCTCCGACACGATCGACA
ACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAG
AGGCTGATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCCGA
TTACAATATCCAGAAGGAATCAACTCTTCACCTCGTGCTTCGTCTCCGTG
GGGGCATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATTACCCTC
GAAGTCGAGAGCTCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGA
CAAGGAAGGGATTCCGCCGGACCAGCAGCGTTTGATCTTCGCTGGCAAGC
AGCTGGAGGATGGAAGGACGCTCGCGGATTACAACATTCAGAAGGAATCA
ACTCTTCATCTGGTTTTGCGTCTGAAGGGTGGCATGCAGATTTTTGTTAA
GACATTGACCGGGAAGACGATTACCCTGGAGGTAGAGAGTTCTGATAC