FC930876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76 HSP 2 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL L+GG Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76 HSP 3 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +D ++ +K K+ +KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 18 EPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.289e-19 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 184 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 408 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77 HSP 2 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 1 Query: 412 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGGM 636 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL L+GG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77 HSP 3 Score: 78.9518 bits (193), Expect = 2.782e-14 Identity = 37/60 (61.67%), Postives = 46/60 (76.67%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 180 E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 18 EPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L+GG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L+GG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L+GG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L+GG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 42/76 (55.26%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L+GG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 3 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +D ++ +K ++ +KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 18 EPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.862e-18 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL LRGG Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76 HSP 2 Score: 91.6633 bits (226), Expect = 4.147e-18 Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL L+GG Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76 HSP 3 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +DT+D +K ++ ++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL LRGG Sbjct: 18 EMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 405 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 2 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGG 633 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL L+GG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 3 Score: 71.633 bits (174), Expect = 4.441e-12 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 177 E +DTI+ +K +I +KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 18 ELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
BLAST of FC930876 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 178 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 408 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG+ Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77 HSP 2 Score: 88.5817 bits (218), Expect = 3.511e-17 Identity = 40/77 (51.95%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 406 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLKGGM 636 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL L+GG+ Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77 HSP 3 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 1 ESSDTIDNVKAKIRDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 180 + +D I +K ++ +KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG+ Sbjct: 18 DPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77 The following BLAST results are available for this feature:
BLAST of FC930876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930876 ID=FC930876; Name=FC930876; organism=Citrus clementina; type=EST; length=698bpback to top |