FC930879
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930879 vs. ExPASy Swiss-Prot
Match: AT8B4_HUMAN (Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.136e-11 Identity = 36/125 (28.80%), Postives = 64/125 (51.20%), Query Frame = 1 Query: 1 DKDLSHKTLMQYPKLYGAGHRQEAYNMQLFWLTMCDTLWQSLVLFYIPLYAYQNST-------IDIWSMGSVWTIAVVILVNILLAMDIQRWVFVTHAAVWGSIITTYACMVVLDS---IPVFPN 345 D+D+S + + P+LY G +N + F++ + ++ SLVLF+IP A+ N D S ++VI+V++ +A+D W F+ H +WGSI ++ + + S +FPN Sbjct: 926 DQDVSDQNSVDCPQLYKPGQLNLLFNKRKFFICVLHGIYTSLVLFFIPYGAFYNVAGEDGQHIADYQSFAVTMATSLVIVVSVQIALDTSYWTFINHVFIWGSIAIYFSILFTMHSNGIFGIFPN 1050
BLAST of FC930879 vs. ExPASy Swiss-Prot
Match: AT8B1_MOUSE (Probable phospholipid-transporting ATPase IC OS=Mus musculus GN=Atp8b1 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 45/171 (26.32%), Postives = 75/171 (43.86%), Query Frame = 1 Query: 1 DKDLSHKTLMQYPKLYGAGHRQEAYNMQLFWLTMCDTLWQSLVLFYIPLYAYQNST-------IDIWSMGSVWTIAVVILVNILLAMDIQRWVFVTHAAVWGSIITTYACMVVLDSIPV---FPNYW----TIYHLAKSPTYWXXXXXXXXXXXXPRFLFKVVQQYFWPSD 471 D+D+S K +++P LY G R +N + F++++ + S+VLF+IPL AY + D S A+VI VN + +D W FV +++GSI + M S + FP+ + T + + P W P + + WPS+ Sbjct: 1004 DQDVSDKLSLRFPGLYVVGQRDLLFNYKRFFVSLLHGVLTSMVLFFIPLGAYLQTVGQDGEAPSDYQSFAVTVASALVITVNFQIGLDTSYWTFVNAFSIFGSIALYFGIMFDFHSAGIHVLFPSAFQFTGTASNALRQPYIWLTIILTVAVCLLPVVAIRFLSMTIWPSE 1174 The following BLAST results are available for this feature:
BLAST of FC930879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930879 ID=FC930879; Name=FC930879; organism=Citrus clementina; type=EST; length=718bpback to top |