FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.900e-61
Identity = 106/183 (57.92%), Postives = 139/183 (75.96%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGT 696
            GY L RDPH NK LAF+ +ER    + GLLPP +++QE+QV +++ N  +      +Y+ +MDLQ+RN+KLFY +L+ NVE+ +PIVYTPTVG ACQ+Y   + +P+G+FIS+ DKG +  VL  WPE  ++ IVVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG+ P  CLP T+DVGT
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLKIHGLLPPCIVNQEIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSNVEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDKGHIASVLNAWPEDVVKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQQCLPITLDVGT 197          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.768e-60
Identity = 104/184 (56.52%), Postives = 141/184 (76.63%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            GY +LRDPH NKG+AF+ +ER    + GLLPP  + Q++QV  +L N  +    L +Y+ +M LQ+RN+KLFYK+L  ++E  +PIVYTPTVG ACQ+YG  + RP+G+FI++ D+G +  +L++WPE  I+ IVVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG++P  CLP  +DVGT+
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHECLPVMLDVGTD 187          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.678e-59
Identity = 104/184 (56.52%), Postives = 139/184 (75.54%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            GY +LRDPH NKG+AF+ +ER    + GLLPP  + Q+ QV  +L N  +    L +Y+ +M LQ+RN+KLFYK+L  ++E  +PIVYTPTVG ACQ YG  + RP+G+FI++ D+G +  +L++WPE  I+ IVVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG++P  CLP  +DVGT+
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVMLDVGTD 187          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 3.739e-59
Identity = 103/184 (55.98%), Postives = 141/184 (76.63%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            GY + R+PH NKG+AF+ +ER    + GL+PP  +SQ++Q+ +++    + Q  L KY+ +M LQ+RN+KLFY++L  +VE+ +PIVYTPTVG ACQ YG  + RP+G+FI++ DKG +  +L +WPE NI+ +VVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG+ P  CLP  +DVGTN
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTN 233          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.421e-58
Identity = 104/183 (56.83%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGT 696
            GY L R PH NK LAF+ +ER    + GLLPP  ISQ++QV +++ N  +      +Y+ +MDLQ+RN+KLFYK+L+ ++E+ +PIVYTPTVG ACQ+Y   + +P+G+FIS+ D+G V  VL  WPE  I+ +VVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG+ P  CLP  +DVGT
Sbjct:    1 GYGLTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFRKPRGLFISIHDRGHVASVLNAWPEDVIKAVVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGVNPQECLPVILDVGT 183          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.856e-58
Identity = 102/184 (55.43%), Postives = 139/184 (75.54%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            GY + R+PH NKG+AF+ +ER    + GL+PP  +SQ++Q+ +++      Q  L KY+ +M  Q+RN+KLFY++L  +VE+ +PIVYTPTVG ACQ YG  + RP+G+FI++ DKG +  +L +WPE NI+ +VVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG+ P  CLP  +DVGTN
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTHQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVNPQQCLPVLLDVGTN 233          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.134e-58
Identity = 103/184 (55.98%), Postives = 141/184 (76.63%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            G  L+ +P  NKG+AF+ +ER    L+GLLPP + +Q++Q  +   N+++   PL+KY+ +M +QERN+KLFY++L D++E L+PIVYTPTVG AC +YG I+ RP+G+FIS+ D+G V  ++ NWPE +++ +VVTDGERILGLGDLG +GMGIPVGKL LYTA  GIRP  CLP  IDVGT+
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIRPDRCLPVCIDVGTD 208          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.203e-57
Identity = 102/183 (55.74%), Postives = 137/183 (74.86%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGT 696
            GY L R+PH NK LAF+ +ER    + GLLPP+  SQE+QV +++ N         +Y+ +MDLQ+RN+KLFY++L  ++E+ +PIVYTPTVG ACQ+Y  ++ +P+G+FI++ D+G +  VL  WPE  I+ IVVTDGERILGLGDLGC+GMGIPVGKL+LYTA GG+ P  CLP  +DVGT
Sbjct:   15 GYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILDVGT 197          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.680e-57
Identity = 102/184 (55.43%), Postives = 141/184 (76.63%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            G  L+ +P  NKG+AF+ +ER    L+GLLPP + +Q++Q  +   N+++   PL+KY+ +M +QERN+KLFY++L D++E L+PIVYTPTVG AC +YG I+ RP+G+FIS+ D+G V  ++ NWPE +++ +VVTDGERILGLGDLG +GMGIPVGKL LYTA  GI+P  CLP  IDVGT+
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTD 208          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOM_ASCSU (NAD-dependent malic enzyme, mitochondrial (Fragment) OS=Ascaris suum PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.229e-53
Identity = 97/183 (53.01%), Postives = 138/183 (75.41%), Query Frame = 1
Query:  157 LLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDK--GKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            LL++P  NKG+ FS  ER    L GLLPP  ++QE Q  +++  +R+    L +Y+ +  LQ+RN+KLFY+++ D+V+EL+PIVYTPTVG ACQ +G IY +P+G++I++ D    K+ ++L NW E++++ IVVTDGERILGLGDLG +G+GIPVGKL+LY ALGG++P  CLP  +DVGTN
Sbjct:   80 LLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQPNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYITINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGVQPKWCLPVLLDVGTN 262          
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAOX_RAT8.900e-6157.92NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOX_ANAPL5.768e-6056.52NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_COLLI1.678e-5956.52NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAON_HUMAN3.739e-5955.98NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAOX_PIG1.421e-5856.83NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAON_MOUSE1.856e-5855.43NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOM_HUMAN4.134e-5855.98NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOX_HUMAN1.203e-5755.74NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOM_MOUSE2.680e-5755.43NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAOM_ASCSU5.229e-5353.01NAD-dependent malic enzyme, mitochondrial (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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