FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERPS (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERPP (NAD-dependent malic enzyme OS=Yersinia pestis (strain Pestoides F) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERPN (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERPE (NAD-dependent malic enzyme OS=Yersinia pestis GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERPB (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERPA (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_YERP3 (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.168e-44
Identity = 90/185 (48.65%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FIS  ++  + ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYRRARGLFISYPNREHIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.525e-44
Identity = 87/185 (47.03%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ LF++LL +++EE++PI+YTPTVG+ACQ++  IY   +G+FIS  D+ ++ ++LR+  + N++++VVTD ERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 198
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.525e-44
Identity = 87/185 (47.03%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ LF++LL +++EE++PI+YTPTVG+ACQ++  IY   +G+FIS  D+ ++ ++LR+  + N++++VVTD ERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 198
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.525e-44
Identity = 87/185 (47.03%), Postives = 128/185 (69.19%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ LF++LL +++EE++PI+YTPTVG+ACQ++  IY   +G+FIS  D+ ++ ++LR+  + N++++VVTD ERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRTHRGLFISYPDRERIDDILRSATKNNVKIVVVTDSERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 198
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_YERPS1.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPP1.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pestis (str... [more]
MAO1_YERPN1.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]
MAO1_YERPE1.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pestis GN=s... [more]
MAO1_YERPB1.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPA1.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]
MAO1_YERP31.168e-4448.65NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_PSEAE1.525e-4447.03NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEAB1.525e-4447.03NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA81.525e-4447.03NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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