FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.427e-42
Identity = 82/185 (44.32%), Postives = 128/185 (69.19%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G ++L  P  NKG AF+++ER    L GLLP  + + E Q  +     + +   L K++ + ++Q+ N+ L+Y+L+ +++ E++PI+YTPTVG AC+++   Y R +G+FIS  +K ++ ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKLSLYT+ GGI P+  LP T+DVGT+
Sbjct:   13 AGPAILEAPLINKGSAFTDEERIFFNLEGLLPHVIETIEEQASRAYDQYKNFTNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKDYRRNRGLFISYPNKDRIDDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTD 197          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.424e-42
Identity = 82/185 (44.32%), Postives = 127/185 (68.65%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G ++L  P  NKG AF+++ER    L GLLP  + + E Q  +       +   L K++ + ++Q+ N+ L+Y+L+ +++ E++PI+YTPTVG AC+++   Y R +G+FIS  +K ++ ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKLSLYT+ GGI P+  LP T+DVGT+
Sbjct:   13 AGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQYTNFTNDLDKHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFISYPNKDRIDDLLNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTD 197          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.252e-42
Identity = 81/185 (43.78%), Postives = 126/185 (68.11%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G ++L  P  NKG AF+++ER    L GLLP  + + E Q  +       +   L +++ + ++Q+ N+ L+Y+L+ +++ E++PI+YTPTVG AC+++   Y R +G+FIS   K ++ ++L N   + +++IVVTDGERILGLGD G  GMGIP+GKLSLYT+ GGI P+  LP T+DVGT+
Sbjct:   13 AGPAILEAPLINKGSAFTDEERVFFNLEGLLPHVIETIEEQASRAYDQYTNFTNDLDRHIYLRNIQDTNETLYYRLVQNHITEMMPIIYTPTVGMACERFSKNYRRNRGLFISYPHKDRIEDILNNSTRQKVKIIVVTDGERILGLGDQGIGGMGIPIGKLSLYTSCGGISPAYTLPITLDVGTD 197          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.206e-38
Identity = 83/186 (44.62%), Postives = 118/186 (63.44%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNW--PEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            G  +L  P  NKG+AFS +ER    L GLLPPTV+S + Q ++     +     L++ + + DL  RN+ LFYKLL +++ E+LP+VYTPTVGEA Q+Y   Y RPQG+++S+ +   + +   N      +I +IV TD E ILG+GD G  G+ I +GKL++YTA  GI PS  +P  +DVGTN
Sbjct:   35 GKEVLSIPTLNKGVAFSLEERQELGLEGLLPPTVLSLDQQAQRAYEQFQAQPDRLRQNVYLSDLANRNEVLFYKLLKNHLREMLPVVYTPTVGEAIQEYSHEYRRPQGIYLSIDNIDGIEKAFENLHATAGDIDLIVATDSESILGIGDWGVGGINIAIGKLAVYTAAAGIDPSRVIPVVLDVGTN 220          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.607e-36
Identity = 79/186 (42.47%), Postives = 116/186 (62.37%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKN--IQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            G  +L  P  NKG+AF+E+ER    L+G LPP V++ + Q K+           L K + +  L +RN+ LFY+LL D++ E+LPIVYTPTVG A Q+Y   Y +P+G+++S+ D   + E  + + +++  I +IV TD E ILG+GD G  G+ I +GKL++YTA  GI PS  L   +D GTN
Sbjct:   18 GLEVLSVPFLNKGVAFTEEERKELGLKGFLPPKVLTIDDQAKRAYEQYSAQPDDLSKNVYLTALHDRNETLFYRLLNDHLGEMLPIVYTPTVGTAIQRYSHEYRKPRGLYLSIDDPDGMKEAFKQYKDQSDTIDLIVATDAEGILGIGDWGVGGIAISIGKLAVYTAAAGIDPSRVLAVVLDAGTN 203          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_MYCTU (Putative malate oxidoreductase [NAD] OS=Mycobacterium tuberculosis GN=mez PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 70/183 (38.25%), Postives = 113/183 (61.75%), Query Frame = 1
Query:  160 LRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRN---WPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            L  P  N+G+ F+  +R    L G LP  V++ + Q +++ H ++     L + + +  L  R++ L++K+L D++ EL+P+VYTPTVGEA Q++   Y   +G+F+S+ +  ++ E        PE ++ +IV TD E ILG+GD G  G+ I VGKL+LYTA GG+ P  CL  ++DVGT+
Sbjct:   13 LSAPSLNRGVGFTHAQRRRLGLTGRLPSAVLTLDQQAERVWHQLQSLATELGRNLLLEQLHYRHEVLYFKVLADHLPELMPVVYTPTVGEAIQRFSDEYRGQRGLFLSIDEPDEIEEAFNTLGLGPE-DVDLIVCTDAEAILGIGDWGVGGIQIAVGKLALYTAGGGVDPRRCLAVSLDVGTD 194          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.348e-31
Identity = 70/184 (38.04%), Postives = 111/184 (60.33%), Query Frame = 1
Query:  151 YSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNW-PEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            + LL  P  NKG AF+++ER +  L  LLPP V + + Q+++    +   + PL K   M  L+ +N+ L++ L+  +++EL+PI+YTPT G+A   Y   + +P+GVF+ + +   +   L  +  +K++  IVV+D E ILG+GD G  G+ I + KL+L T  GGI P   LP  +DVGTN
Sbjct:  101 FQLLNSPLFNKGSAFTQEEREAFNLEALLPPQVNTLDEQLERSYKQLCYLKTPLAKNDFMTSLRVQNKVLYFALIRRHIKELVPIIYTPTEGDAIAAYSHRFRKPEGVFLDITEPDSIECRLATYGGDKDVDYIVVSDSEGILGIGDQGIGGVRIAISKLALMTLCGGIHPGRVLPVCLDVGTN 284          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MLES_OENOE (Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30
Identity = 73/184 (39.67%), Postives = 104/184 (56.52%), Query Frame = 1
Query:  154 SLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQG-VFISLKDKGKVLEVLRNWPE-KNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            S+L DP  NKG AF+E ER    L GLLP  V + + QV +     +     L+K + +M++   N  LFYKL   +V E +PIVY PT+ +  + Y  ++  PQG  F+ +     +   L+N    ++I+++VV+D E ILG+GD G  G+ I VGKL +YT   GI PS  L   ID GTN
Sbjct:    6 SILNDPFINKGTAFTEAEREELGLNGLLPAKVQALQEQVDQTYAQFQSKVSNLEKRLFLMEIFNTNHVLFYKLFSQHVVEFMPIVYDPTIADTIENYSELFVEPQGAAFLDINHPENIQSTLKNAANGRDIKLLVVSDAEGILGIGDWGVQGVDIAVGKLMVYTVAAGIDPSTVLAVVIDAGTN 189          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 72/185 (38.92%), Postives = 106/185 (57.30%), Query Frame = 1
Query:  151 YSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQ-GVFISLKDKGKVLEVLRNWP-EKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            + +L +P  NKG AF+ KER    L GLLPPTV + E Q ++           L+K   +M++   N+ LFY L   ++ E  P+VY PT+ +  + Y  ++  PQ   ++ +     + E L+N   ++ I++IVVTD E ILG+GD G  G+ I VGKL +YTA  GI P++ LP  ID GTN
Sbjct:    4 HEILNNPFLNKGTAFTMKERQELGLIGLLPPTVQTIEEQAEQTYEQYLTKPSDLEKRHFLMEIFNTNRTLFYYLFNKHIVEFNPVVYDPTIADTIENYSHLFVDPQYAAYLDINHPENITETLKNAAGDREIRLIVVTDAEGILGIGDWGTQGVDISVGKLMIYTAAAGIDPASVLPVVIDAGTN 188          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 67/188 (35.64%), Postives = 106/188 (56.38%), Query Frame = 1
Query:  148 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQY-QVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISL--KDKGKVLEVLRNWPEK-NIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            G +LL  P +NK  AF+ +ER    +   LPP V + + QV +     +     PLQK + +  L   NQ LFY L+  ++ E++PI+YTPT G+A +++  IY  P+G ++ +   D   + + L  + +  +++ I++TD E ILG+GD G  G+ I V K  L T   G+ P+  LP  +DVGTN
Sbjct:   15 GVTLLNSPRYNKDTAFTPEERQKFEISSRLPPIVETLQQQVDRCYDQYKAIGDEPLQKNLYLSQLSVTNQTLFYALISQHLIEMIPIIYTPTEGDAIKQFSDIYRYPEGCYLDIDHNDLSYIKQQLSEFGKSDSVEYIIITDSEGILGIGDQGVGGVLISVAKGHLMTLCAGLDPNRFLPIVLDVGTN 202          
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHEPW1.427e-4244.32NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_SHESH5.424e-4244.32NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_SHEWM9.252e-4243.78NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO2_BACSU6.206e-3844.62Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAO3_BACSU2.607e-3642.47Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAOX_MYCTU1.934e-3138.25Putative malate oxidoreductase [NAD] OS=Mycobacter... [more]
MAOM_YEAST7.348e-3138.04NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MLES_OENOE2.138e-3039.67Malolactic enzyme OS=Oenococcus oeni GN=mleA PE=3 ... [more]
MLES_LACLA6.221e-3038.92Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAOX_SCHPO4.929e-2735.64NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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