FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50
Identity = 95/185 (51.35%), Postives = 134/185 (72.43%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            SG +LL  P  NKG AFS++ER +  L GLLPP   S E Q ++     R ++ P+ K++ +  +Q+ N+ LFY+LL D++EE++PI+YTPTVG+AC+K+  IY   +G+FIS  ++ ++ ++LRN  ++ ++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   13 SGPNLLETPLLNKGSAFSKEERAAFNLTGLLPPRYESIEEQAERAYMQYRSFETPINKHIYLRAIQDNNETLFYRLLTDHLEEMMPIIYTPTVGDACEKFSDIYRSSRGLFISYSERDQIDDILRNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVMLDVGTN 197          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ACIAD (NAD-dependent malic enzyme OS=Acinetobacter sp. (strain ADP1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.581e-49
Identity = 92/185 (49.73%), Postives = 135/185 (72.97%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +GY+LL  P  NKG AF+++ER+   L GL+P  + + E Q ++       +   + K++ + ++Q+ N+ LFY+L+ D++EE++PI+YTPTVGEACQ++  IY R +G+FIS  D+  + ++L+N  ++N++VIV+TDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP TIDVGTN
Sbjct:   17 AGYTLLELPLLNKGSAFTQEERSHFNLHGLIPHVIETIEEQSQRSYQQYGAFNDDINKHIYLRNIQDTNETLFYRLINDHLEEMMPIIYTPTVGEACQRFSDIYRRHRGIFISYPDREHIDDILQNVSKRNVKVIVITDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPITIDVGTN 201          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.983e-49
Identity = 92/185 (49.73%), Postives = 134/185 (72.43%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            SG +LL  P  NKG AFS +ER+S  L GLLP  + + E Q  +  H +R +   + K++ + ++Q+ N+ LF+ L+  ++EE++P++YTPTVG+AC+K+  IY R +G+FIS  D+ K+ ++L+N  ++ ++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP  +DVGTN
Sbjct:   12 SGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSLRAYHQLRSFTTDIDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPDRHKIDDMLQNATKQKVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTN 196          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 92/185 (49.73%), Postives = 135/185 (72.97%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G +LL  P  NKG AF+ +ER+S  L GLLP  + + E Q ++       +   L K++ + ++Q+ N+ LFY+LL +++ E+LP++YTPTVG+AC+++ +IY R +G+FIS  DK ++ ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+ CLP  +DVGTN
Sbjct:   16 AGPALLETPLLNKGCAFTSEERSSFNLEGLLPQNIETIEEQAERAYRQFMAFGNDLDKHIYLRNIQDTNETLFYRLLHNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYCLPVVLDVGTN 200          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.878e-48
Identity = 90/185 (48.65%), Postives = 135/185 (72.97%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G +LL  P  NKG AF+ +ER++  L GLLP  + + E Q ++       +   + K++ + ++Q+ N+ LFY+LL +++ E+LP++YTPTVG+AC+++ +IY R +G+FIS  DK ++ ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+ CLP  +DVGTN
Sbjct:   16 AGPALLETPLLNKGSAFTSEERSNFNLEGLLPQNIETIEEQAERAYRQFMAFGNDMDKHIYLRNIQDTNETLFYRLLTNHLTEMLPVIYTPTVGKACEEFSNIYRRARGLFISYPDKDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYCLPVVLDVGTN 200          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47
Identity = 91/189 (48.15%), Postives = 128/189 (67.72%), Query Frame = 1
Query:  133 VSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            V+  +G  +L DP  NKG AF+  E++   +RGL+PP   S E Q K+   N+ +   PL+K++ +  LQ RN+ L+YK++++N  EL PI+YTP VGEACQK+  I+++ +G++ S  D+G++  V  NWP  ++ VIVVTDG RILGLGDLG  GM IP+GKL+LY   GGI P   LP  +DVGTN
Sbjct:   42 VTKKTGLDILNDPKLNKGSAFTADEKDRLGIRGLVPPRPQSLEAQYKRCKTNLDKISDPLEKFIYLNHLQNRNETLYYKMILENFVELAPIIYTPVVGEACQKFHKIFTQTRGMYFSTADRGQMSAVAANWPYDDVDVIVVTDGSRILGLGDLGAGGMQIPIGKLTLYVCGGGINPRNVLPIVLDVGTN 230          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_PSYCK (NAD-dependent malic enzyme OS=Psychrobacter cryohalolentis (strain K5) GN=sfcA PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.474e-47
Identity = 90/185 (48.65%), Postives = 134/185 (72.43%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G +LL  P  NKG AFS +ER+S  L GLLP  + + E Q  +    +R +   + K++ + ++Q+ N+ LF+ L+  ++EE++P++YTPTVG+AC+K+  IY R +G+FIS  ++ K+ ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP  +DVGTN
Sbjct:   12 AGPALLETPLLNKGSAFSSEERDSFNLTGLLPHNIETIEEQSSRAYLQLRSFTSDMDKHIYLRNIQDTNETLFHHLIEQHIEEVMPLIYTPTVGQACEKFSQIYRRKRGLFISYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPILLDVGTN 196          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47
Identity = 90/191 (47.12%), Postives = 129/191 (67.54%), Query Frame = 1
Query:  157 LLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVP----------LQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +L DP  NKG AFS  ER+  ++RGLLPP V+S E Q+ + + ++++ +V           L K+  +  L +RN+ L+YK+L++N+EE  PIVYTPTVG  CQKY  ++ RP+G++ S +D+G+++ ++ NWP   + +IVVTDG RILGLGDLG  G+GI +GKL LY A  GI P   LP  IDVGT+
Sbjct:   52 ILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENIEEYAPIVYTPTVGLVCQKYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGIQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTD 242          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.288e-47
Identity = 88/185 (47.57%), Postives = 135/185 (72.97%), Query Frame = 1
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G +LL  P  NKG AFS++ERN+  L GLLP  + + E Q  +    +  ++  L K++ + ++Q+ N+ LF+ L+ +++EE++P++YTPTVG AC+++  IY R +G+F+S  ++ K+ ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKL+LYTA GGI P+ CLP  +DVGTN
Sbjct:   12 AGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYRRKRGLFVSYPERHKIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLALYTACGGISPAYCLPIVLDVGTN 196          
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.600e-47
Identity = 90/191 (47.12%), Postives = 128/191 (67.02%), Query Frame = 1
Query:  157 LLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVP----------LQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +L+DP  NKG AFS  ER+   LRGLLPP V++ E Q+++   ++R  ++           L K+  +  L +RN+ +F+K+LI+N+EE  PIV TPTVG  CQK+  +Y RP+G++ S  D+G+++ ++ NWP + + +IVVTDG RILGLGDLG HG+G+ +GKL LY A  GI P   LP  IDVGTN
Sbjct:   49 ILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMTTEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENIEEYAPIVSTPTVGLVCQKFSGLYRRPRGMYFSSDDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVHGIGVAIGKLDLYVAAAGINPQRVLPVMIDVGTN 239          
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_IDILO5.412e-5051.35NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]
MAO1_ACIAD4.581e-4949.73NAD-dependent malic enzyme OS=Acinetobacter sp. (s... [more]
MAO1_PSYA25.983e-4949.73NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_AERS41.333e-4849.73NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAO1_AERHH3.878e-4848.65NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAOH_NEOFR1.474e-4748.15Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_PSYCK1.474e-4748.65NAD-dependent malic enzyme OS=Psychrobacter cryoha... [more]
MAOM_SOLTU1.925e-4747.12NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAO1_PSYIN4.288e-4747.57NAD-dependent malic enzyme OS=Psychromonas ingraha... [more]
MAOM_AMAHP5.600e-4747.12NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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