FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11050 contig Ccv1_Contig11050:13..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALPA (NAD-dependent malic enzyme OS=Salmonella paratyphi A GN=sfcA PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALNS (NAD-dependent malic enzyme OS=Salmonella newport (strain SL254) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALHS (NAD-dependent malic enzyme OS=Salmonella heidelberg (strain SL476) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALEP (NAD-dependent malic enzyme OS=Salmonella enteritidis PT4 (strain P125109) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALCH (NAD-dependent malic enzyme OS=Salmonella choleraesuis GN=sfcA PE=3 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ +++EE++P++YTPTVG AC+++  IY R +GVFIS  ++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYRRARGVFISYPNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46
Identity = 88/185 (47.57%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G +L+  P  NKG AFS +ER+S  L GLLP T  + + QV++     + ++  + K++ + ++Q+ N+ LFY+L+ +++ E++PI+YTPTVG AC+ + +IY R +G+FIS  ++ ++ ++L N    N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   13 AGPALMATPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYRRGRGLFISYPNRDRIDDLLNNAANHNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPIVLDVGTN 197
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFSE+ERN+  L GLLP  + + E QV++       +    ++++ + ++Q+ N+ LFY+LL  ++ E++PI+YTPTVGEAC+ +  IY R +G+FI+  ++ ++ ++L+N  ++N++VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPILLEFPLLNKGSAFSEEERNTFNLNGLLPEAIETIEEQVERAYRQFCDFHSATEQHIYLRNIQDTNETLFYRLLRSHLSEMMPIIYTPTVGEACEHFSYIYRRARGLFIAYPNRDRIDDMLQNATKQNVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALPA2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella paratyphi... [more]
MAO1_SALNS2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella newport (... [more]
MAO1_SALHS2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella heidelber... [more]
MAO1_SALEP2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella enteritid... [more]
MAO1_SALDC2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_SALCH2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella choleraes... [more]
MAO1_SALAR2.128e-4649.73NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_SALA42.128e-4649.73NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO1_VIBPA2.779e-4647.57NAD-dependent malic enzyme OS=Vibrio parahaemolyti... [more]
MAO1_EDWI92.779e-4648.65NAD-dependent malic enzyme OS=Edwardsiella ictalur... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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