FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SHIBS (NAD-dependent malic enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=sfcA PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_SHIB3 (NAD-dependent malic enzyme OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ESCF3 (NAD-dependent malic enzyme OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOUT (NAD-dependent malic enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=sfcA PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOSM (NAD-dependent malic enzyme OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLU (NAD-dependent malic enzyme OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLI (NAD-dependent malic enzyme OS=Escherichia coli (strain K12) GN=sfcA PE=3 SV=4)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOLC (NAD-dependent malic enzyme OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL6 (NAD-dependent malic enzyme OS=Escherichia coli O6 GN=sfcA PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOL5 (NAD-dependent malic enzyme OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SHIBS8.087e-4648.65NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_SHIB38.087e-4648.65NAD-dependent malic enzyme OS=Shigella boydii sero... [more]
MAO1_ESCF38.087e-4648.65NAD-dependent malic enzyme OS=Escherichia ferguson... [more]
MAO1_ECOUT8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOSM8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLU8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O17... [more]
MAO1_ECOLI8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOLC8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOL68.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O6 ... [more]
MAO1_ECOL58.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O6:... [more]

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Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
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