FC930880

Overview
NameFC930880
Unique NameFC930880
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOK1 (NAD-dependent malic enzyme OS=Escherichia coli O1:K1 / APEC GN=sfcA PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOHS (NAD-dependent malic enzyme OS=Escherichia coli O9:H4 (strain HS) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECODH (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / DH10B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECOBW (NAD-dependent malic enzyme OS=Escherichia coli (strain K12 / BW2952) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECO8A (NAD-dependent malic enzyme OS=Escherichia coli O8 (strain IAI1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECO81 (NAD-dependent malic enzyme OS=Escherichia coli O81 (strain ED1a) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECO7I (NAD-dependent malic enzyme OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECO5E (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
[Close]
BLAST of FC930880 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 90/185 (48.65%), Postives = 132/185 (71.35%), Query Frame = 1 
Query:  145 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMLHNIRQYQVPLQKYMAMMDLQERNQKLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIYSRPQGVFISLKDKGKVLEVLRNWPEKNIQVIVVTDGERILGLGDLGCHGMGIPVGKLSLYTALGGIRPSACLPXTIDVGTN 699
            +G  LL  P  NKG AFS +ER +  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ LFY+L+ ++++E++P++YTPTVG AC+++  IY R +GVFIS +++  + ++L+N P  NI+VIVVTDGERILGLGD G  GMGIP+GKLSLYTA GGI P+  LP  +DVGTN
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERRNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPVIYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTN 200
The following BLAST results are available for this feature:
BLAST of FC930880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECOK18.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O1:... [more]
MAO1_ECOHS8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O9:... [more]
MAO1_ECODH8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECOBW8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO8A8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O8 ... [more]
MAO1_ECO818.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O81... [more]
MAO1_ECO7I8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O7:... [more]
MAO1_ECO5E8.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO578.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO558.087e-4648.65NAD-dependent malic enzyme OS=Escherichia coli (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34110A07EF PostHarvP1 Citrus clementina cDNA clone C34110A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930880 ID=FC930880; Name=FC930880; organism=Citrus clementina; type=EST; length=700bp
ACAGCTACATTAAAAGAAATGAGAGATGGCTATGCCGAAGTTGTGGACCC
CAAGTCCGGCGTCAGCGGTGGGGTCCAGGACGTTTATGGTGAGGATACCG
CCACCGAAGACCAGCCTGTCACCCCTTGGTCTGTCTCAGTTGCTAGTGGG
TATTCTTTGTTGAGAGATCCACACCACAACAAAGGGCTTGCCTTCTCTGA
AAAAGAAAGGAATTCACATTACTTGCGTGGTCTTCTCCCCCCTACAGTTA
TATCCCAAGAGCTCCAGGTGAAGAAAATGTTGCATAATATTCGGCAGTAC
CAAGTTCCACTCCAGAAGTACATGGCCATGATGGATCTTCAGGAGAGAAA
TCAGAAACTGTTCTATAAGCTTCTCATTGACAATGTTGAGGAGTTACTCC
CAATTGTCTATACTCCAACTGTTGGAGAAGCTTGCCAGAAGTACGGGAGC
ATCTATAGTCGTCCTCAGGGTGTTTTTATCAGTTTGAAGGATAAGGGCAA
GGTTCTTGAGGTATTGAGGAACTGGCCTGAGAAGAATATTCAAGTCATTG
TTGTCACTGATGGGGAGCGGATTCTAGGACTAGGAGATCTCGGTTGTCAC
GGAATGGGAATACCCGTTGGCAAACTTTCTTTATACACAGCACTTGGAGG
AATTCGTCCTTCAGCTTGCTTGCCTNGTACCATTGATGTGGGGACAAACA
back to top