FC930881

Overview
NameFC930881
Unique NameFC930881
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15417 contig Ccv1_Contig15417:200..897. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31
Identity = 80/227 (35.24%), Postives = 125/227 (55.07%), Query Frame = 1
Query:   13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVE 687
            G E+  S+P+V +RE++ + S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPK  +K L+E  G D D+A+ +     +    NM +D  KG+QYLNE+ D ++ GF  A  EG LA+E +  +   + D  +H D +HRG  Q+ P  R  I+ + + A P L EP   V I  P + +G +   ++Q+RG +  +M++ G  +      PV E
Sbjct:  453 GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLAE-LGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLVDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSREISQRRGQLI-DMRQEGEVMTIIAEAPVAE 672          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METMT (Elongation factor 2 OS=Methanococcoides methylutens GN=fusA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.272e-31
Identity = 82/222 (36.94%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPR-DDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIP 675
            G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +G I  R  + + R K+++   G DKD AK+I     +    N   DM KG+Q+LNE  + V+ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +  S  P
Sbjct:  454 GVEISTTPPIVVYRETITG-TAGPVEGKSPNRHNRFYVVVEPLEPEVRELIREGEISMRMPELERREKLIAA--GLDKDEAKRI----ADIFESNAYFDMTKGIQHLNETMELVLEGFVEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQTPQEQMGGATKEIQGRRGIIIDMTSEGDTTIIESKAP 668          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.243e-30
Identity = 80/212 (37.74%), Postives = 116/212 (54.72%), Query Frame = 1
Query:   19 EIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPG 648
            E+  S+P+V +RETV EK       KSPNKHNR Y E  PL+  + +AI+DG I      K +  I+      G D++ A+ + C      G N++ D+ +G+QYL+E  + ++  F      G LA E + G+   + D  LH D+IHRG  QVIP  R  IY +   AK  LLEPV  V I  P++ +G   + + Q+RG V E+M + G
Sbjct:  455 EVETSEPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKTIIETLVSKGIDREEARGLVCVE----GTNIMFDVTRGIQYLDETMELLIEAFTEVMNRGPLANEKVFGVKARLVDAKLHEDSIHRGPAQVIPAGRNSIYGAMCEAKRILLEPVQKVFINVPQEEMGSAINEVQQRRG-VIEDMTQEG 660          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.623e-30
Identity = 75/225 (33.33%), Postives = 120/225 (53.33%), Query Frame = 1
Query:   10 GGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRS---KILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIP 675
            GG E+   +P+V +RET+   S   +  KSPNKHN+LYM A P++E +  A  +G+I   D  K  +   +    E G +K+ AK++          NM+V+M +G+  L+E ++ ++ GF+   + G LA E ++G+   + D   H DAIHRG  Q+IP  R  +  +   AKP LLEP+  V I  P+  +G     +N +RG + +  Q     +  S +P
Sbjct:  456 GGIEVDVGEPIVVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLEKEQAKRVMSI----YNGNMIVNMTRGIVQLDEARELIIEGFKEGVRNGPLAAEKVQGVKIRLVDATFHEDAIHRGPAQIIPAVRFGVRDAVAQAKPVLLEPMQSVYINTPQDYMGDGMKEINNRRGQILDMEQEGDMSIIKSSVP 675          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METBU (Elongation factor 2 OS=Methanococcoides burtonii (strain DSM 6242) GN=fusA PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.616e-30
Identity = 81/221 (36.65%), Postives = 114/221 (51.58%), Query Frame = 1
Query:   13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIP 675
            G EI  + P+V +RET+   +   V  KSPN+HNR Y+   PLE  + E I +  I  R  P+V  +      G +KD AKKI          N   DM KG+QYLNE  + ++ GF    K G L++E   G+  ++ D  LH DA+HRG  QVIP +R+ I A+ L A   L EP   V IQ P++ +GG    +  +RG + +      T +  S  P
Sbjct:  454 GVEITTTPPLVVYRETITG-TAGPVEGKSPNRHNRFYVIVEPLEPEVRELIRNDEISMRM-PEVERREKLMAAGLNKDEAKKI----VNIFESNAYFDMTKGIQYLNETMELIIEGFTEVMKAGPLSKEPCMGVKVKLMDAKLHEDAVHRGPAQVIPASRQAIQAAMLMADDTLFEPYQKVFIQVPQEQMGGATKEIQGRRGVIIDMTSEGDTTVIESKAP 668          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METAC (Elongation factor 2 OS=Methanosarcina acetivorans GN=fusA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.723e-30
Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:   19 EIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRG 618
            EI  S P+V +RET+ +K+   +  KSPN+HNR Y+ A PL+  +  AI +G +   + P++  +    + G +K+ AK I          N+ +DM KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP AR+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG
Sbjct:  456 EITTSKPIVVYRETIKKKT-EPIEGKSPNRHNRFYIYAEPLDTEIVSAIKEGEVS-MNLPELERRQKLIDLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPAARQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG 649          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METMA (Elongation factor 2 OS=Methanosarcina mazei GN=fusA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.169e-30
Identity = 81/223 (36.32%), Postives = 115/223 (51.57%), Query Frame = 1
Query:   19 EIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVE 687
            EI  S P+V +RET+ +K+   +  KSPN+HNR Y+   PL+  +  AI +G I   + P++  +    E G DK+ AK I          N+ +D  KG+QYLNE  + V+ GF+   + G L  E +  +   + D  LH DAIHRG  Q+IP +R+ I A  L A+  LLEP   V +Q P+  +GG    L  +RG V   M   G         PV E
Sbjct:  456 EITTSKPIVVYRETIKKKT-EPIEGKSPNRHNRFYISVEPLDLEIVSAIKEGEI-TMNMPELERRQKLIELGMDKEQAKGI----AGIFNSNIFIDQTKGIQYLNETMELVLDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQIIPASRQAIQAGMLMAEDSLLEPYQKVFVQVPQLLMGGATKELQGRRG-VILNMTTEGDLAIIEARVPVAE 671          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29
Identity = 79/227 (34.80%), Postives = 122/227 (53.74%), Query Frame = 1
Query:   13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVE 687
            G +I  S+P+V +RE++  KS   V  KSPN+HNR Y+   P+ + +  AI +G I  G   +PK  +K L+E  G D ++A+ I     +    NM +D  KGVQYLNE+ D ++ GF  A  EG LA E +  +   + D  +H D +HRG  Q+ P  R  I+ + + + P L EP   V I  P + +G +   + Q+RG +  +M++ G  +      PV E
Sbjct:  453 GIDIEVSEPIVVYRESIT-KSSPMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRVKNPKEVAKKLAE-LGMDYEIARGI----VDIYNGNMFIDNTKGVQYLNEVMDLLIDGFHQAMDEGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEGEVMTIIAEAPVAE 672          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.222e-29
Identity = 78/227 (34.36%), Postives = 123/227 (54.19%), Query Frame = 1
Query:   13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVE 687
            G +I  S+P+V +RE++ + S   V  KSPN+HNR Y+   P+ + +  AI +G I  G   +PK  +K L+E  G D ++A+ I     +    NM +D  KGVQYLNE+ D ++ GF  A  EG LA+E +  +   + D  +H D +HRG  Q+ P  R  I+ + + + P L EP   V I  P + +G +   + Q+RG +  +M++ G  +      PV E
Sbjct:  453 GIDIDVSEPIVVYRESITKPS-PMVEGKSPNRHNRFYIVVEPMPDEIYNAIKEGIIPEGRIKNPKEVAKKLAE-LGMDYEIARGI----VDVYNGNMFLDNTKGVQYLNEVMDLLIDGFHQAMDEGPLAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEGEVMTIIAEAPVAE 672          
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METBF (Elongation factor 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=fusA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.163e-28
Identity = 80/223 (35.87%), Postives = 113/223 (50.67%), Query Frame = 1
Query:   19 EIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVE 687
            EI  S P+V +RET+ +K    V  KSPN+HNR Y+   PL+  +  AI  G I   + P++  +    + G +K+ AK I          N+ +DM KG+QYLNE  + ++ GF+   + G L  E +  +   + D  LH DAIHRG  QVIP +R+ I A  L A   LLEP   V +Q P+  +GG    L  +RG +   M   G         PV E
Sbjct:  456 EITTSKPIVVYRETI-KKKIEPVEGKSPNRHNRFYIYVEPLDLEIVSAIKSGEIH-MNLPELERRQKLIDLGMEKEEAKGI----VGIFNSNIFIDMTKGIQYLNETMELILDGFEEVMRAGPLTREPVANVKCVLVDAKLHEDAIHRGPAQVIPASRQAIQAGMLMADDTLLEPYQKVFVQVPQLLMGGATKELQGRRG-IILNMSTEGDLAIIEARVPVAE 671          
The following BLAST results are available for this feature:
BLAST of FC930881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
EF2_PYRFU4.272e-3135.24Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_METMT4.272e-3136.94Elongation factor 2 OS=Methanococcoides methyluten... [more]
EF2_THEVO1.243e-3037.74Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]
EF2_METM61.623e-3033.33Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METBU3.616e-3036.65Elongation factor 2 OS=Methanococcoides burtonii (... [more]
EF2_METAC4.723e-3037.50Elongation factor 2 OS=Methanosarcina acetivorans ... [more]
EF2_METMA6.169e-3036.32Elongation factor 2 OS=Methanosarcina mazei GN=fus... [more]
EF2_PYRHO1.795e-2934.80Elongation factor 2 OS=Pyrococcus horikoshii GN=fu... [more]
EF2_PYRAB5.222e-2934.36Elongation factor 2 OS=Pyrococcus abyssi GN=fusA P... [more]
EF2_METBF1.163e-2835.87Elongation factor 2 OS=Methanosarcina barkeri (str... [more]

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Properties
Property NameValue
Genbank descriptionC34110A08EF PostHarvP1 Citrus clementina cDNA clone C34110A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930881 ID=FC930881; Name=FC930881; organism=Citrus clementina; type=EST; length=698bp
GATTTCATGGGTGGTGCTGAGATTATCAAATCTGATCCTGTTGTGTCCTT
CCGTGAGACTGTCCTTGAGAAGTCCTGCCGTACTGTTATGAGCAAGTCTC
CAAACAAACACAATCGTCTCTATATGGAAGCCCGGCCATTGGAGGAAGGT
CTTGCTGAGGCAATTGATGATGGTCGTATTGGTCCAAGGGATGATCCTAA
GGTTCGTTCTAAGATTCTGTCTGAGGAATTTGGTTGGGACAAGGATCTTG
CCAAGAAAATCTGGTGTTTTGGTCCTGAGACCATTGGTCCTAACATGGTT
GTGGATATGTGCAAGGGAGTTCAGTACTTGAATGAAATTAAGGATTCAGT
TGTTGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAAA
ACATGAGGGGCATTTGCTTTGAAGTTTGTGATGTGGTTCTTCATGCCGAT
GCTATCCACAGAGGTGGTGGCCAGGTTATTCCAACTGCTAGAAGGGTCAT
TTATGCATCCCAGCTTACAGCCAAACCAAGGCTTCTTGAGCCTGTCTACT
TGGTGGAAATCCAAGCTCCTGAACAGGCACTTGGTGGTATTTACAGTGTT
CTTAACCAGAAACGTGGTCACGTTTTTGAGGAGATGCAGAGACCTGGTAC
CCCACTTTATACATCAGGCATACCTCCGGTCGTTGAGTCTTTGGATTT
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