FC930881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_METTE (Elongation factor 2 OS=Methanosarcina thermophila GN=fusA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28 Identity = 76/200 (38.00%), Postives = 107/200 (53.50%), Query Frame = 1 Query: 19 EIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRG 618 EI S P+V +RET+ +K V KSPN+HNR Y+ PL+ + E I G I + P++ + E G K+ AK I N+ +D+ KG+QYLNE + ++ GF+ + G L E + + + D LH DAIHRG QVIP AR+ I A L A+ LLEP V +Q P+ +GG L +RG Sbjct: 456 EITTSKPIVVYRETI-KKKIEPVEGKSPNRHNRFYIYVEPLDTAIVEMIKSGDIS-MNLPELERRQKLIELGMGKEEAKGIVGIH----NSNIFIDITKGIQYLNETMELILDGFEEVMRAGPLTREPVANMKCVLVDAKLHEDAIHRGPAQVIPAARQAIQAGMLMAEDCLLEPYQKVFVQVPQLTMGGATKELQGRRG 649
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28 Identity = 76/227 (33.48%), Postives = 119/227 (52.42%), Query Frame = 1 Query: 13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVESL 693 G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + IG N+ +D KG+Q+LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G + GI PV E + Sbjct: 454 GIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEGDLMVVEGIAPVDEMI 673
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.984e-28 Identity = 76/227 (33.48%), Postives = 119/227 (52.42%), Query Frame = 1 Query: 13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVESL 693 G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + IG N+ +D KG+Q+LNE + VV G + ++G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G + GI PV E + Sbjct: 454 GIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVVDGLTDSLEDGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEGDLMVVEGIAPVDEMI 673
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26 Identity = 77/228 (33.77%), Postives = 118/228 (51.75%), Query Frame = 1 Query: 13 GAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSE---EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIPPVVE 687 G E+ +P+V +RE V S V KSPNKHNRLY A PL+E + A +G I D K K + E G +++ AK++ N++++M +G+ L+E ++ ++ GF+ A K G LA E +G+ ++ D V H DAIHRG Q+IP R + + A LLEP+ V I P+ +G L+ +RG + +M++ G PV E Sbjct: 457 GVEVDVGEPIVVYREAVNGVSPE-VEGKSPNKHNRLYFVAEPLDECVYNAHVEGLIKDEDFKKKTPKEVETKLVEIGMNREEAKRVMTI----YEGNVLLNMTRGIVQLDEARELIIEGFKEAVKNGPLAAEKCQGVKVKLMDAVFHEDAIHRGPAQLIPAVRTGVRDAIAQANVGLLEPIQNVYISTPQDYMGDAMKELSNRRGQIL-DMEQEGDMTTIKSKAPVSE 678
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 69/245 (28.16%), Postives = 123/245 (50.20%), Query Frame = 1 Query: 19 EIIKSDPVVSFRETVLEKSCRTV-MSKSPNKHNR-------LYMEARPLEEGLAEAIDDGRIGP----------RDDPKVRSKILSEEFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADA-IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRG-HVFEEMQRPGTPLY-TSGIPPVVES 690 EI SDP+ F E+ +S ++ +S S ++ + + A P++ + + + +G D+P+ SKIL E+GWD ++ +W F + N + + L++ K+ ++ GF WA KEG LAEE + G+ +++ + + +D I Q+IP ++ Y LTA P LLEP+Y V+I L + ++ ++RG +++ ++ GTPL G PV+ES Sbjct: 667 EIKISDPLTVFSESCSNESFASIPVSNSISRLGEENLPGLSISVAAEPMDSKMIQDLSRNTLGKGQNCLDIDGIMDNPRKLSKILRTEYGWDSLASRNVWSFYNGNVLINDTLPDEISPELLSKYKEQIIQGFYWAVKEGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIES 911
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 65/225 (28.89%), Postives = 108/225 (48.00%), Query Frame = 1 Query: 19 EIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGL----AEAIDDGRIGPRDDPKVRSKILSE--EFGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYTSGIP 675 +II S+P+V +RE+V + V KSPNK N+ Y+ + + L E + G + K+ I+ G+ ++ A++ E NM DM +G+ ++ E+ D V+ F G +A E G+ ++ D LH DAIHRG GQVIP R I + A L EPV ++ + P +G + +++N +RG + + L + +P Sbjct: 468 DIITSNPIVVYRESV-KGQAGPVEGKSPNKLNKFYITVEKMPDELYWKLREKLLKGELPEGKIKKMNEDIIKHLMSLGFTREEAQRCKVIYRE----NMFFDMTRGIIHIGEVIDMVMDAFMQVMDHGPIAWEPCIGLIVKLTDAQLHEDAIHRGPGQVIPAVREAIKLAMKDAGLVLYEPVQVILVDVPPDYIGDVTALINSRRGAILDIQTEEDRALIKAKVP 687
BLAST of FC930881 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15 Identity = 70/246 (28.46%), Postives = 113/246 (45.93%), Query Frame = 1 Query: 31 SDPVVSFRETVLEKSCRTVMSKSPN--KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEE---FGWDKDLAKKIWCFGPETIGPNMVVDMCKGVQYL-----------NEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRG---------GGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLY-TSGIPPVVES 690 S VV F L K +T+ + S N K NR + + L + + E + + R SK+L EE G K+ I FGP+ +GPN++ D K ++ +++ + VV FQ + +G L E ++GIC + + D+ GQVI + I L PRL+ +Y ++QA + LG +Y V++++RG V +E + GTP + + PVVES Sbjct: 679 SGSVVDF----LLKHSKTIENVSSNFSKKNRNVVVSESLTKSMEEVLTPEKFYER-----LSKLLEEENSDLGELKNHLDSIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEPVQGICVSIDQFDISDDSEDSKLLTINNPQIPGQVISVVKESIRHGFLGWSPRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVES 915 The following BLAST results are available for this feature:
BLAST of FC930881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930881 ID=FC930881; Name=FC930881; organism=Citrus clementina; type=EST; length=698bpback to top |