FC930887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.102e-27 Identity = 60/148 (40.54%), Postives = 92/148 (62.16%), Query Frame = 2 Query: 209 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 640 + R+ KEL L +PP + + + +A I+G +++PY GVF + + P YPF+PP+V F T ++HPNI+S+G ICLDIL K W P+L I+ VL SI L+ +PNPDDPL+ +I+ +K +K + A+ WT+ +A Sbjct: 4 ASRLKKELHMLAIEPPPGITCWQEKDQVADLRAQILGGANTPYEKGVFTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTEAHA 151
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2L3_MOUSE (Ubiquitin-conjugating enzyme E2 L3 OS=Mus musculus GN=Ube2l3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 57/146 (39.04%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 637 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2L3_HUMAN (Ubiquitin-conjugating enzyme E2 L3 OS=Homo sapiens GN=UBE2L3 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 57/146 (39.04%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 637 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2L3_BOVIN (Ubiquitin-conjugating enzyme E2 L3 OS=Bos taurus GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 57/146 (39.04%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 637 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27 Identity = 57/146 (39.04%), Postives = 92/146 (63.01%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 637 AS+R++KEL++++K + V E ++ WQ I+ P + PY G F + I+FP +YPFKPPK+ F+TK++HPNI+ G +CL ++ E W PA +V+ S+ +L+ DP P+ PL ++A Y D+ K+ A +T+KY Sbjct: 3 ASRRLMKELEEIRKCGMKNFRNIRVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBC37_ARATH (Probable ubiquitin carrier protein E2 37 OS=Arabidopsis thaliana GN=UBC37 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.682e-27 Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 2 Query: 209 SKRILKELKDLQKDPPTSCS------AGPVAEDMFHWQ---ATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 640 S R+ KELK L DPP S A + D + A I GP D+ YA G+F + I P YPF+PP V+F T ++HPNI+++G ICLDIL K W P+L IS VL S+ LL++PNPDD L+ E++ YK ++ ++ AR T+KYA Sbjct: 8 SLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKYNRQTFDYKAREMTEKYA 164
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.115e-27 Identity = 58/148 (39.19%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 607 A KR+LKEL+ L KD P AGP +E+ +F W I GP D+PYA GVF + FP DYP PPK+ F + HPNI NG +C+ IL +E+WSP ++ K+LLS+ S+L++PN + + +++ ++ ++E Sbjct: 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFE 152
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBCD4_DROME (Ubiquitin-conjugating enzyme E2-22 kDa OS=Drosophila melanogaster GN=UbcD4 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26 Identity = 63/152 (41.45%), Postives = 88/152 (57.89%), Query Frame = 2 Query: 203 MASKRILKELKDLQKDPPT---SCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 646 MA RI +E K++ + S V + + I GP D+PY GG F++ I P YPF PPKV F T+++HPNI+S G+ICLDILK+ W+ A+T+ VLLS+ +LL PDDP +A+ +K + TA+ WT YA G Sbjct: 4 MAVSRIKREFKEVMRSEEIVQCSIKIELVNDSWTELRGEIAGPPDTPYEGGKFVLEIKVPETYPFNPPKVRFITRIWHPNISSVTGAICLDILKDNWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVAYQFKDKYDLFLLTAKHWTNAYAGG 155
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26 Identity = 58/145 (40.00%), Postives = 83/145 (57.24%), Query Frame = 2 Query: 212 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 646 +++ KE+ L DPP P ED+ Q I GP +PYAGG+F + + D+P PPK F TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y S AR T+ +A G Sbjct: 14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQG 158
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.964e-26 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = 2 Query: 215 RILKELKDLQKDPPTSCSAGPVAED--MFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYESTARSWTQKYAM 643 R+ KE K++Q++ + +D +F W A I GPS++PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ +S D + S A+ +T+ AM Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153 The following BLAST results are available for this feature:
BLAST of FC930887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930887 ID=FC930887; Name=FC930887; organism=Citrus clementina; type=EST; length=683bpback to top |