FC930887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 224 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 595 ++L +L K+P SAG + + D++ W+ I+GP D+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 224 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 595 ++L +L K+P SAG + + D++ W+ I+GP D+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24 Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2 Query: 224 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 595 ++L +L K+P SAG + + D++ W+ I+GP D+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL +E+W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24 Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 212 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 640 ++++KEL+D++ PP D+ QA I GP+ +PYA GVF V + D+P PPK F TK+FHPN+ SNG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 17 RQVMKELQDMETTPPEGIKVLINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24 Identity = 56/143 (39.16%), Postives = 77/143 (53.85%), Query Frame = 2 Query: 218 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 646 + KE+ L DPP P ED+ +I GP +PYAGGVF + + D+P PP+ F TK+FHPN+ G IC+++LK W L + VLL+I LL PNP+ L E + D +Y S A T+ +AMG Sbjct: 16 VYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHAMG 158
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.846e-24 Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 2 Query: 224 KELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE-------------QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDK 595 ++L +L K+P SAG + + D++ W+ I+GP D+ Y GGVF + FP DYP +PPK+ F T+++HPN++ NG +C+ IL E +W P T+ +++S+ S+L DPN D P + A ++ D+ Sbjct: 12 RQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.328e-24 Identity = 56/147 (38.10%), Postives = 86/147 (58.50%), Query Frame = 2 Query: 206 ASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 604 AS + K+LKDL K P SAG V E ++F W +IMGP D+ Y GG F + FP +YP PP V F ++++HPN+ S+G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E A ++ ++A++ Sbjct: 6 ASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEF 152
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.265e-24 Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 212 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 640 ++++KEL+D++ PP D+ QA I GP+ +PYA G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 17 RQVMKELQDMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.079e-23 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 212 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 640 K++ +E+ L DPP ED+ QA+I GP+ +PY GG+F + + D+P PPK F TK+FHPN+ NG IC++ LK+ W P L I +VLL++ LL PNP+ L E + Y A+ +T+ +A Sbjct: 17 KQVAREIHGLTNDPPEGIKVFSNDEDITDIQASIEGPTGTPYEGGIFKIKLVLGKDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHA 159
BLAST of FC930887 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.410e-23 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 212 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 640 +++++EL++++ PP D+ QA I GP+ +PYA G+F V + D+P PPK F TK+FHPN+ +NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159 The following BLAST results are available for this feature:
BLAST of FC930887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930887 ID=FC930887; Name=FC930887; organism=Citrus clementina; type=EST; length=683bpback to top |