FC930890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.890e-31 Identity = 56/118 (47.46%), Postives = 91/118 (77.12%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG+ NKITITNDKGRLSK+E+E+MV+EAE+YKAEDE + +V AKN+LE + ++++ ++++E + K+ D+ K++D + + WL+ NQLA+ +E+E + +ELE IC PI +++Y Sbjct: 496 STGKANKITITNDKGRLSKEEVERMVREAEQYKAEDEAQRDRVAAKNSLETHVFHVKGSLQEESLRDKIPKEDRHKVQDKCQEVLAWLEHNQLADKEEYEHQKRELEQICRPIFSRLY 613
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 3.774e-31 Identity = 57/118 (48.31%), Postives = 91/118 (77.12%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG+ NKITITNDKGRLSK+E+E+MV EAE+YKAEDE + +V AKN+LE + ++++ ++++E + K+ D++K++D + + WL+ NQLAE +E+E + +ELE IC PI +++Y Sbjct: 496 STGKANKITITNDKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLY 613
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 4.929e-31 Identity = 60/117 (51.28%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ KITITNDKGRLSK+EI++MV EAEKYK EDE+ ++ AKN LE+YAY+++ T +++ K+D + ++ + AI++ I WLD+NQ A DE+EDK KELE I N + +Y Sbjct: 495 TGKSQKITITNDKGRLSKEEIDRMVAEAEKYKEEDEKEAARIAAKNGLESYAYSLKQTASEKQFEEKVDASKRESLNKAIEETISWLDNNQSATTDEYEDKRKELEGIANDALKDLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.438e-31 Identity = 60/118 (50.85%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL P DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSPEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.438e-31 Identity = 62/118 (52.54%), Postives = 91/118 (77.12%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KN+I I ND+ RLS ++IE+M+ +AEKY ED++ K+KV+AKN LE+YAY+++N + D EK+G+KL DK+KI +A+D+AI+WL+SN AE++ F +K ELE I PI+ K+Y Sbjct: 527 TGSKNQIVIQNDQNRLSPEDIERMINDAEKYADEDKKVKEKVDAKNELESYAYSLKNQIGDKEKLGAKLSDEDKEKITEAVDEAIKWLESNAEAESEAFNEKKTELEGIVQPIMTKLY 644
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.408e-31 Identity = 59/118 (50.00%), Postives = 93/118 (78.81%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++A+N LE+YAY+++N + D EK+G KL DK+ IE A+++ I+WL+S+Q A+ ++F+ K KELE + PI++K+Y Sbjct: 516 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKSKKKELEEVVQPIVSKLY 633
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.098e-30 Identity = 56/118 (47.46%), Postives = 89/118 (75.42%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG+ NKITITNDKGRLSK+E+E+MV+EA++YK EDE + +V AKN+LE Y ++++ ++ +E + K+ D+ K++D + + WL+ NQLAE +E+E + +ELE IC PI +++Y Sbjct: 496 STGRANKITITNDKGRLSKEEVERMVREADEYKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQDKCQEVLTWLEHNQLAEKEEYEHQKRELEQICRPIFSRLY 613
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 60/118 (50.85%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNK+TITND RLS ++IE+M+ +A+K+ A+D+ K+KVE++N LE YAY M+ + D EK+G KL DK IE A+++AI+WL SNQ A +E +++ KELES+ PI++K+Y Sbjct: 520 TGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 59/118 (50.00%), Postives = 91/118 (77.12%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL DK+ IE A+++ I+WL+S+Q A+ ++F+ K KELE I PI+ K+Y Sbjct: 519 TGNKNKITITNDQNRLTPEEIERMVTDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIVGKLY 636
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635 The following BLAST results are available for this feature:
BLAST of FC930890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930890 ID=FC930890; Name=FC930890; organism=Citrus clementina; type=EST; length=398bpback to top |