FC930890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 519 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.450e-30 Identity = 59/118 (50.00%), Postives = 92/118 (77.97%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED++ K++++ +N LE+YAY+++N + D EK+G KL DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 519 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 62/117 (52.99%), Postives = 86/117 (73.50%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG++NKITITNDKGRLSK+EIE+MV +A+KYKAEDE+ + +V AKN+LE+Y Y M+ V+ E + K+ +D++ I + I WLD +Q AE E+E K +ELE +C PII K+Y Sbjct: 493 TGKQNKITITNDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVYTMKQQVEGE-LKEKIPESDRQVIISKCEDTISWLDVHQSAEKHEYESKREELEKVCAPIITKVY 608
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 59/118 (50.00%), Postives = 91/118 (77.12%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG KNKITITND+ RL+ +EIE+MV +AEK+ ED+ K++++ +N LE+YAY+++N + D EK+G KL DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I PII+K+Y Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKRLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.586e-29 Identity = 58/117 (49.57%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ KITITNDKGRLS++EIE+MV EAEKYK EDE+ K++ AKN LE+YAY+++ T +++ K++ + ++ A D I WLD NQ A A+E++DK KELE N ++ +Y Sbjct: 493 TGKSEKITITNDKGRLSQEEIERMVSEAEKYKEEDEKEAKRIAAKNGLESYAYSLKQTTSEKQFEEKVEASKREAFTKACDDTIAWLDENQTATAEEYDDKRKELEQAGNEVLKDLY 609
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.533e-29 Identity = 56/117 (47.86%), Postives = 85/117 (72.65%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ KITI NDKGRLS ++IE+M+++AE++ ED++ ++ +AKN LE+Y YN+RNT + ++ KL+ ADK+ +E + + I+WLDSN A DE +DK KE+E NPI+ K+Y Sbjct: 493 TGKSEKITIRNDKGRLSSEQIEEMLKQAEQFAEEDKQALERTQAKNGLESYIYNVRNTTNEPQLKDKLEAADKEALEKIVKEGIEWLDSNTTASTDELKDKQKEIEEQVNPIMTKIY 609
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 4.614e-29 Identity = 59/118 (50.00%), Postives = 87/118 (73.73%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG+ ITI NDKGRLS+ EI++MV EAEKY EDE+H++++ ++NALE+Y +N++ +V+ G KLD ADK + D ++ I+WLDSN AE +EF+ KM+EL C+PI+ KM+ Sbjct: 492 STGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMH 608
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 4.614e-29 Identity = 59/118 (50.00%), Postives = 87/118 (73.73%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG+ ITI NDKGRLS+ EI++MV EAEKY EDE+H++++ ++NALE+Y +N++ +V+ G KLD ADK + D ++ I+WLDSN AE +EF+ KM+EL C+PI+ KM+ Sbjct: 492 STGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMH 608 The following BLAST results are available for this feature:
BLAST of FC930890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930890 ID=FC930890; Name=FC930890; organism=Citrus clementina; type=EST; length=398bpback to top |