FC930890

Overview
NameFC930890
Unique NameFC930890
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length398
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJR (Chaperone protein dnaK OS=Campylobacter jejuni (strain RM1221) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14
Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  +I IT   G LS++EI  MV++AE +K ED++ K+ V+A+NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY
Sbjct:  487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJE (Chaperone protein dnaK OS=Campylobacter jejuni GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14
Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  +I IT   G LS++EI  MV++AE +K ED++ K+ V+A+NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY
Sbjct:  487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJ8 (Chaperone protein dnaK OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14
Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  +I IT   G LS++EI  MV++AE +K ED++ K+ V+A+NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY
Sbjct:  487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 3.210e-14
Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL 265
            +TG+   ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EAK  LE+Y  ++  TV D  + SKL    K KIE A+  A+  L
Sbjct:  498 STGKSANITISNAVGRLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKTKIEAALADALSAL 585          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 4.192e-14
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAI 256
            +TG+   ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EAK  LE+Y  ++  TV D  + SKL    K KIE A+  A+
Sbjct:  498 STGKSANITISNAVGRLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKTKIEAALADAL 582          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJD (Chaperone protein dnaK OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaK PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.151e-14
Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  +I IT   G LS++EI  MV++AE +K ED++ K+ V+ +NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY
Sbjct:  487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDVRNAADSLAHQVEKSLSE--LGEKVATADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_OENOB (Chaperone protein dnaK OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.593e-13
Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  KITI N  G LS+DEI KMV++AE  +  D++ K++V+  N ++   ++   T+ D  +G KL  +DKK ++DA+D+  +  DSN +   +  ++K   LE     +  K+Y
Sbjct:  460 TGKSQKITIQNP-GNLSEDEINKMVKDAESNEEADKKKKEEVDLHNQVDQLIFSSEKTLSD--VGDKLGDSDKKPVQDALDELKKAKDSNNI---ETLKEKKDALEKAAQALAVKLY 570          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 3.549e-13
Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 292
            +TG+   ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EA+  LE+Y  ++  TV D  + +K+    K K+E A+  A   L   + +  D
Sbjct:  498 STGKTANITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSDPVLSAKMKKGAKSKVEAALADAFSALQIEESSAED 594          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_HELMI (Chaperone protein dnaK OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.635e-13
Identity = 41/117 (35.04%), Postives = 70/117 (59.83%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG + KITIT   G LSK+EIE+M+++AE +  ED + +++VE +N  ++  Y    T+KD  +G K + ADK KIE A ++  + L+   +   +E + K + L ++   +  K+Y
Sbjct:  464 TGNEQKITITASTG-LSKEEIERMIKDAELHAEEDRKRQEEVEIRNQADSMVYQAEKTLKD--LGDKAEAADKAKIESAKEELKKALEGTDM---EEIKKKTEALTTVVYELSTKLY 574          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.054e-13
Identity = 34/89 (38.20%), Postives = 56/89 (62.92%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268
            TTG+   I ITN  G LS  +I++M++ A+K+K +D++  KK+EAK+ LE+Y  N+  T+ +  +  KL   DK KIE  + + +  L+
Sbjct:  497 TTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLE 585          
The following BLAST results are available for this feature:
BLAST of FC930890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
DNAK_CAMJR2.458e-1436.75Chaperone protein dnaK OS=Campylobacter jejuni (st... [more]
DNAK_CAMJE2.458e-1436.75Chaperone protein dnaK OS=Campylobacter jejuni GN=... [more]
DNAK_CAMJ82.458e-1436.75Chaperone protein dnaK OS=Campylobacter jejuni sub... [more]
HSP75_CANGA3.210e-1446.59Heat shock protein SSB OS=Candida glabrata GN=SSB1... [more]
HSP75_KLUDE4.192e-1447.06Heat shock protein SSB OS=Kluyveromyces delphensis... [more]
DNAK_CAMJD7.151e-1435.90Chaperone protein dnaK OS=Campylobacter jejuni sub... [more]
DNAK_OENOB1.593e-1335.04Chaperone protein dnaK OS=Oenococcus oeni (strain ... [more]
HSP75_ASHGO3.549e-1339.18Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]
DNAK_HELMI4.635e-1335.04Chaperone protein dnaK OS=Heliobacterium modestica... [more]
HSP75_SCHPO6.054e-1338.20Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]

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Properties
Property NameValue
Genbank descriptionC34110B06EF PostHarvP1 Citrus clementina cDNA clone C34110B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930890 ID=FC930890; Name=FC930890; organism=Citrus clementina; type=EST; length=398bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTGA
AGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATTGCCAAGA
TGTATNCAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGATGATG
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