FC930890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJR (Chaperone protein dnaK OS=Campylobacter jejuni (strain RM1221) GN=dnaK PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14 Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ +I IT G LS++EI MV++AE +K ED++ K+ V+A+NA ++ A+ + ++ + +G K+ ADK+ I+ A+D + L NQ A +E E KMK L + + + MY Sbjct: 487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJE (Chaperone protein dnaK OS=Campylobacter jejuni GN=dnaK PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14 Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ +I IT G LS++EI MV++AE +K ED++ K+ V+A+NA ++ A+ + ++ + +G K+ ADK+ I+ A+D + L NQ A +E E KMK L + + + MY Sbjct: 487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJ8 (Chaperone protein dnaK OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dnaK PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.458e-14 Identity = 43/117 (36.75%), Postives = 72/117 (61.54%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ +I IT G LS++EI MV++AE +K ED++ K+ V+A+NA ++ A+ + ++ + +G K+ ADK+ I+ A+D + L NQ A +E E KMK L + + + MY Sbjct: 487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 3.210e-14 Identity = 41/88 (46.59%), Postives = 56/88 (63.64%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL 265 +TG+ ITI+N GRLS ++IEKMV +AE++KA DE K+ EAK LE+Y ++ TV D + SKL K KIE A+ A+ L Sbjct: 498 STGKSANITISNAVGRLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKTKIEAALADALSAL 585
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 4.192e-14 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAI 256 +TG+ ITI+N GRLS ++IEKMV +AE++KA DE K+ EAK LE+Y ++ TV D + SKL K KIE A+ A+ Sbjct: 498 STGKSANITISNAVGRLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKTKIEAALADAL 582
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJD (Chaperone protein dnaK OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaK PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.151e-14 Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ +I IT G LS++EI MV++AE +K ED++ K+ V+ +NA ++ A+ + ++ + +G K+ ADK+ I+ A+D + L NQ A +E E KMK L + + + MY Sbjct: 487 TGKAQEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDVRNAADSLAHQVEKSLSE--LGEKVATADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMY 599
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_OENOB (Chaperone protein dnaK OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dnaK PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.593e-13 Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG+ KITI N G LS+DEI KMV++AE + D++ K++V+ N ++ ++ T+ D +G KL +DKK ++DA+D+ + DSN + + ++K LE + K+Y Sbjct: 460 TGKSQKITIQNP-GNLSEDEINKMVKDAESNEEADKKKKEEVDLHNQVDQLIFSSEKTLSD--VGDKLGDSDKKPVQDALDELKKAKDSNNI---ETLKEKKDALEKAAQALAVKLY 570
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.549e-13 Identity = 38/97 (39.18%), Postives = 58/97 (59.79%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 292 +TG+ ITI+N GRLS ++IEKMV +AE++KA DE K+ EA+ LE+Y ++ TV D + +K+ K K+E A+ A L + + D Sbjct: 498 STGKTANITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSDPVLSAKMKKGAKSKVEAALADAFSALQIEESSAED 594
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: DNAK_HELMI (Chaperone protein dnaK OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dnaK PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.635e-13 Identity = 41/117 (35.04%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 TG + KITIT G LSK+EIE+M+++AE + ED + +++VE +N ++ Y T+KD +G K + ADK KIE A ++ + L+ + +E + K + L ++ + K+Y Sbjct: 464 TGNEQKITITASTG-LSKEEIERMIKDAELHAEEDRKRQEEVEIRNQADSMVYQAEKTLKD--LGDKAEAADKAKIESAKEELKKALEGTDM---EEIKKKTEALTTVVYELSTKLY 574
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.054e-13 Identity = 34/89 (38.20%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 268 TTG+ I ITN G LS +I++M++ A+K+K +D++ KK+EAK+ LE+Y N+ T+ + + KL DK KIE + + + L+ Sbjct: 497 TTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLE 585 The following BLAST results are available for this feature:
BLAST of FC930890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930890 ID=FC930890; Name=FC930890; organism=Citrus clementina; type=EST; length=398bpback to top |