FC930892

Overview
NameFC930892
Unique NameFC930892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CYAP4 (Adenine phosphoribosyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=apt PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.206e-18
Identity = 47/101 (46.53%), Postives = 71/101 (70.30%), Query Frame = 2
Query:  173 SVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            ++ ++ GI++RGFIFG P+A+ +GA FVP+RK  KL  E+ + EY+LEYG   +E+H  A+  G R LIVDDL+A GGT +AA +L+    G + ++ FI+
Sbjct:   48 AIDYVAGIESRGFIFGAPLAYKLGAGFVPIRKAGKLCAEVHTVEYALEYGTDRLEIHKDAIHTGGRVLIVDDLIATGGTAAAAAQLITLCGGDLVSYAFII 148          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_THEPX (Adenine phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 45/95 (47.37%), Postives = 66/95 (69.47%), Query Frame = 2
Query:  197 KARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHIFILIYIQML 481
            +ARGF+FG P+A+ +G  FVP+RKP KLP E +S EY LEYG   +E+H  AV  G+R +IVDDL+A GGT+ A+ +L+  +   +  +I++  L
Sbjct:   59 EARGFLFGAPLAYRLGVGFVPVRKPGKLPAETLSYEYELEYGTDSLEIHKDAVLEGQRVVIVDDLLATGGTIYASAKLVEKLGGIVDSIIFLSEL 153          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_STAHJ (Adenine phosphoribosyltransferase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 49/101 (48.51%), Postives = 68/101 (67.33%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+A+++G  F P+RK  KLP E+I  EY LEYG  ++ MH  A++ G+R LI DDL+A GGT+ AAI+L   LG +   I  +I ++ LN
Sbjct:   54 GPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNILTMHNDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLN 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_SHEON (Adenine phosphoribosyltransferase OS=Shewanella oneidensis GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            G +ARGF+FG P+A  +G  FVP+RKP KLP   IS+ Y LEYG   +E+H  A+ A ++ L+VDDL+A GGT+ A ++L+    G +Q+  F++
Sbjct:   60 GTEARGFLFGAPLALGLGIGFVPVRKPGKLPRATISQSYELEYGHDSLEIHTDAITANDKVLVVDDLLATGGTIEATVKLIRQLGGEVQDAAFVI 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_EDWI9 (Adenine phosphoribosyltransferase OS=Edwardsiella ictaluri (strain 93-146) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            G +ARGF+FG P+A A+G  FVP+RKP KLP   ++E Y+LEYG   +E+H  A+ A +R L+VDDL+A GGT+ A  RL+
Sbjct:   62 GTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLAESYALEYGTDTLEIHQDAIDANDRVLMVDDLLATGGTIEATTRLI 142          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ANASK (Adenine phosphoribosyltransferase OS=Anaeromyxobacter sp. (strain K) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            GI++RGFIF  PIA+A+GA F  +RKP KLP E I E Y+LEYG+  +E+H+ A+  G+R L+VDD++A GGT  AA RL+
Sbjct:   56 GIESRGFIFAAPIAYALGAGFTIVRKPGKLPWETIREVYALEYGEGALELHIDAIGPGDRVLVVDDVLATGGTAGAAGRLV 136          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ANADE (Adenine phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            GI++RGFIF  PIA+A+GA F  +RKP KLP E I E Y+LEYG+  +E+H+ A+  G+R L+VDD++A GGT  AA RL+
Sbjct:   56 GIESRGFIFAAPIAYALGAGFTIVRKPGKLPWETIREVYALEYGEGALELHIDAIGPGDRVLVVDDVLATGGTAGAAGRLV 136          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ANAD2 (Adenine phosphoribosyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            GI++RGFIF  PIA+A+GA F  +RKP KLP E I E Y+LEYG+  +E+H+ A+  G+R L+VDD++A GGT  AA RL+
Sbjct:   56 GIESRGFIFAAPIAYALGAGFTIVRKPGKLPWETIREVYALEYGEGALELHIDAIGPGDRVLVVDDVLATGGTAGAAGRLV 136          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ACTPJ (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=apt PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAA---IRLLGSMQNHIFILIYI 472
            G ++RGFIFG P+A A+G  FV +RKPKKLP  +IS+ Y+LEYG+  +E+H+ +V+  +  L+VDDL+A GGT+ A    IR LG    H   +I++
Sbjct:   58 GTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWL 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ACTP7 (Adenine phosphoribosyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=apt PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.575e-18
Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAA---IRLLGSMQNHIFILIYI 472
            G ++RGFIFG P+A A+G  FV +RKPKKLP  +IS+ Y+LEYG+  +E+H+ +V+  +  L+VDDL+A GGT+ A    IR LG    H   +I++
Sbjct:   58 GTESRGFIFGAPVALALGVPFVLVRKPKKLPRAVISQSYALEYGEDTLEIHLDSVKENDNVLMVDDLLATGGTIDATAKLIRRLGGKVEHAAFVIWL 154          
The following BLAST results are available for this feature:
BLAST of FC930892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CYAP41.206e-1846.53Adenine phosphoribosyltransferase OS=Cyanothece sp... [more]
APT_THEPX1.575e-1847.37Adenine phosphoribosyltransferase OS=Thermoanaerob... [more]
APT_STAHJ1.575e-1848.51Adenine phosphoribosyltransferase OS=Staphylococcu... [more]
APT_SHEON1.575e-1846.32Adenine phosphoribosyltransferase OS=Shewanella on... [more]
APT_EDWI91.575e-1853.09Adenine phosphoribosyltransferase OS=Edwardsiella ... [more]
APT_ANASK1.575e-1855.56Adenine phosphoribosyltransferase OS=Anaeromyxobac... [more]
APT_ANADE1.575e-1855.56Adenine phosphoribosyltransferase OS=Anaeromyxobac... [more]
APT_ANAD21.575e-1855.56Adenine phosphoribosyltransferase OS=Anaeromyxobac... [more]
APT_ACTPJ1.575e-1847.42Adenine phosphoribosyltransferase OS=Actinobacillu... [more]
APT_ACTP71.575e-1847.42Adenine phosphoribosyltransferase OS=Actinobacillu... [more]

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Properties
Property NameValue
Genbank descriptionC34110B08EF PostHarvP1 Citrus clementina cDNA clone C34110B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930892 ID=FC930892; Name=FC930892; organism=Citrus clementina; type=EST; length=740bp
GACCAAACATTTTTCCTCACTCTCTCATAATAGAAACCCTAGAATAAAAA
TCGATCAGAAAAGCCACCATTCTGCCACCGTCCAAACCATCATTCTCAAT
TGGACACCCATTTCGCATCGTTTTTCAGTCTCTTTGTCCTTTCGCCACAA
GTTGTTCAGCGAACCCTCACCTTCGGTTCGATTCTTGCAAGGTATTAAAG
CTAGGGGTTTTATATTTGGGCCTCCTATTGCATGGGCTATTGGGGCATAG
TTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAGATTATTTCCGA
AGAGTATTCCTTGGAATATGGAAAATATGTAATGGAGATGCATGTATGTG
CTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAATT
GGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGGTAGTATGCAAAACCA
TATATTTATATTGATATACATACAAATGCTGAATGCTTGCTTTTCTTCAT
ACATTCTTCTTTTTTCATACAGCTGCTGTTTTTGCTGTCGAAATGTGCAA
AGATAGCTGCTGTTGTTCTGTTCAAAAGTGCAGAAACAACAGTTGTTTCT
GCTGTTTTGAACAGGAAAAACAGTAGCTGTGTCTGAAATGCACTGATGAT
TCGTGTCTGAATTAATTTTGTTCCCATGAATCTTGCAGTCGCTTTGTAGT
TTTAATTTCATTAAGCGCTGTCAGAGATGTATTGTACTGG
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