FC930892

Overview
NameFC930892
Unique NameFC930892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CLOCE (Adenine phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=apt PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18
Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 2 
Query:  149 KLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHIFILIY 469
            K  +E       + G ++RGFIFG P+A+ +   FVP+RK  KLP + + EEY LEYGK  +E+H  A+  GE+ LIVDDL+A GGT  A I+L+  +   +  ++Y
Sbjct:   41 KTLAEKMGDFDLIVGSESRGFIFGAPLAYRMEKGFVPVRKKGKLPYKTVREEYDLEYGKDELEIHSDAIAPGEKVLIVDDLLATGGTTEANIKLVEKLGGEVTGIVY 147
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CHLCH (Adenine phosphoribosyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=apt PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18
Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 2 
Query:  107 PISHRFSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            P+  R  +    +H L  E       + GI+ARGFI G  +++ +G  FVP+RKP KLP +++S+EY LEYG   +E+H  A+  G+R L+VDDL+A GGT  AA  L+
Sbjct:   30 PVGFRLVIDHLTQHYL--EAGMDFDVIVGIEARGFIIGGALSYTLGKGFVPVRKPGKLPADVVSQEYELEYGSDKIEIHTDALVEGQRVLLVDDLLATGGTALAAAALV 136
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ANASP (Adenine phosphoribosyltransferase OS=Anabaena sp. (strain PCC 7120) GN=apt PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.983e-18
Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = 2 
Query:  131 SLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            ++ F  +  SE + ++ ++ G+++RGFIFG P+A+ +GA F+P+RK  KLP  + S EY LEYG   +E+H  A+    R LIVDDL+A GGT SA  +L+
Sbjct:   36 TIDFLAEKCSEANLNIDYVIGMESRGFIFGTPLAYKLGAGFIPVRKKGKLPAAVHSIEYELEYGTDCLEVHRDALHPDSRVLIVDDLIATGGTASATAKLV 136
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_VIBVY (Adenine phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 2 
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAA---IRLLGSMQNHIFILI 466
            G +ARGF+FG P+A  +G  FVP+RKP KLP   I++ Y LEYG   +E+H  A+  G++ L+VDDL+A GGT+ A    IR LG +  H   +I
Sbjct:   60 GTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVI 154
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_VIBVU (Adenine phosphoribosyltransferase OS=Vibrio vulnificus GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 2 
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAA---IRLLGSMQNHIFILI 466
            G +ARGF+FG P+A  +G  FVP+RKP KLP   I++ Y LEYG   +E+H  A+  G++ L+VDDL+A GGT+ A    IR LG +  H   +I
Sbjct:   60 GTEARGFLFGAPLALQLGVGFVPVRKPGKLPRNTIAQSYELEYGVDTLEIHTDAIVEGDKVLVVDDLLATGGTIEATTKLIRQLGGVVEHAAFVI 154
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_STRZP (Adenine phosphoribosyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2 
Query:  176 VRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            V  + G +ARGFI G P+A+ +G  F P+RKP KLP E+IS +Y  EYG   + MH  A++ G+R LIVDDL+A GGT+ A I +   LG +      L+ +  LN
Sbjct:   49 VDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELN 154
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_STRR6 (Adenine phosphoribosyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2 
Query:  176 VRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            V  + G +ARGFI G P+A+ +G  F P+RKP KLP E+IS +Y  EYG   + MH  A++ G+R LIVDDL+A GGT+ A I +   LG +      L+ +  LN
Sbjct:   49 VDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELN 154
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_STRPN (Adenine phosphoribosyltransferase OS=Streptococcus pneumoniae GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2 
Query:  176 VRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            V  + G +ARGFI G P+A+ +G  F P+RKP KLP E+IS +Y  EYG   + MH  A++ G+R LIVDDL+A GGT+ A I +   LG +      L+ +  LN
Sbjct:   49 VDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELN 154
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_STRPJ (Adenine phosphoribosyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2 
Query:  176 VRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            V  + G +ARGFI G P+A+ +G  F P+RKP KLP E+IS +Y  EYG   + MH  A++ G+R LIVDDL+A GGT+ A I +   LG +      L+ +  LN
Sbjct:   49 VDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELN 154
[Close]
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_STRPI (Adenine phosphoribosyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=apt PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.814e-18
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 2 
Query:  176 VRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            V  + G +ARGFI G P+A+ +G  F P+RKP KLP E+IS +Y  EYG   + MH  A++ G+R LIVDDL+A GGT+ A I +   LG +      L+ +  LN
Sbjct:   49 VDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELN 154
The following BLAST results are available for this feature:
BLAST of FC930892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CLOCE5.983e-1842.99Adenine phosphoribosyltransferase OS=Clostridium c... [more]
APT_CHLCH5.983e-1843.12Adenine phosphoribosyltransferase OS=Chlorobium ch... [more]
APT_ANASP5.983e-1844.55Adenine phosphoribosyltransferase OS=Anabaena sp. ... [more]
APT_VIBVY7.814e-1847.37Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_VIBVU7.814e-1847.37Adenine phosphoribosyltransferase OS=Vibrio vulnif... [more]
APT_STRZP7.814e-1845.28Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRR67.814e-1845.28Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPN7.814e-1845.28Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPJ7.814e-1845.28Adenine phosphoribosyltransferase OS=Streptococcus... [more]
APT_STRPI7.814e-1845.28Adenine phosphoribosyltransferase OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionC34110B08EF PostHarvP1 Citrus clementina cDNA clone C34110B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930892 ID=FC930892; Name=FC930892; organism=Citrus clementina; type=EST; length=740bp
GACCAAACATTTTTCCTCACTCTCTCATAATAGAAACCCTAGAATAAAAA
TCGATCAGAAAAGCCACCATTCTGCCACCGTCCAAACCATCATTCTCAAT
TGGACACCCATTTCGCATCGTTTTTCAGTCTCTTTGTCCTTTCGCCACAA
GTTGTTCAGCGAACCCTCACCTTCGGTTCGATTCTTGCAAGGTATTAAAG
CTAGGGGTTTTATATTTGGGCCTCCTATTGCATGGGCTATTGGGGCATAG
TTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAGATTATTTCCGA
AGAGTATTCCTTGGAATATGGAAAATATGTAATGGAGATGCATGTATGTG
CTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAATT
GGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGGTAGTATGCAAAACCA
TATATTTATATTGATATACATACAAATGCTGAATGCTTGCTTTTCTTCAT
ACATTCTTCTTTTTTCATACAGCTGCTGTTTTTGCTGTCGAAATGTGCAA
AGATAGCTGCTGTTGTTCTGTTCAAAAGTGCAGAAACAACAGTTGTTTCT
GCTGTTTTGAACAGGAAAAACAGTAGCTGTGTCTGAAATGCACTGATGAT
TCGTGTCTGAATTAATTTTGTTCCCATGAATCTTGCAGTCGCTTTGTAGT
TTTAATTTCATTAAGCGCTGTCAGAGATGTATTGTACTGG
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