FC930892

Overview
NameFC930892
Unique NameFC930892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BACC1 (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+++A+   F P+RK  KLP E+I+ +Y  EYGK V+ +H  A++ G+R LI DDL+A GGT+ A I+L   LG +   I  L+ +  L+
Sbjct:   54 GPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLD 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BACC0 (Adenine phosphoribosyltransferase OS=Bacillus cereus (strain AH820) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+++A+   F P+RK  KLP E+I+ +Y  EYGK V+ +H  A++ G+R LI DDL+A GGT+ A I+L   LG +   I  L+ +  L+
Sbjct:   54 GPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLD 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BACAN (Adenine phosphoribosyltransferase OS=Bacillus anthracis GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+++A+   F P+RK  KLP E+I+ +Y  EYGK V+ +H  A++ G+R LI DDL+A GGT+ A I+L   LG +   I  L+ +  L+
Sbjct:   54 GPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLD 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BACAH (Adenine phosphoribosyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+++A+   F P+RK  KLP E+I+ +Y  EYGK V+ +H  A++ G+R LI DDL+A GGT+ A I+L   LG +   I  L+ +  L+
Sbjct:   54 GPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLD 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BACAC (Adenine phosphoribosyltransferase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+++A+   F P+RK  KLP E+I+ +Y  EYGK V+ +H  A++ G+R LI DDL+A GGT+ A I+L   LG +   I  L+ +  L+
Sbjct:   54 GPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLD 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BACAA (Adenine phosphoribosyltransferase OS=Bacillus anthracis (strain A0248) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRL---LGSMQNHIFILIYIQMLN 484
            G +ARGFI G P+++A+   F P+RK  KLP E+I+ +Y  EYGK V+ +H  A++ G+R LI DDL+A GGT+ A I+L   LG +   I  L+ +  L+
Sbjct:   54 GPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGKDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLD 154          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ACISJ (Adenine phosphoribosyltransferase OS=Acidovorax sp. (strain JS42) GN=apt PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            G+ ARGFI G  +A+ +   FVP+RK  KLP   + E Y LEYG   +E+H  AVQ G+R L++DDL+A GGT+ A  +LL
Sbjct:   63 GLDARGFILGAVVAYELNVGFVPIRKKGKLPFTTVEETYELEYGSATVELHADAVQPGDRVLLIDDLIATGGTMMAGKKLL 143          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT2_METM7 (Adenine phosphoribosyltransferase 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=apt2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16
Identity = 40/100 (40.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  173 SVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHIFILIYI 472
            ++  + G +ARGF+FG P+A  +   FVP+RKP KLP +  S +Y+LEYG   +E+H   ++ G+   IVDDL+A GGT+S   +L+  +  H+  L ++
Sbjct:   48 NIDIIVGPEARGFLFGVPVAHELDIGFVPVRKPGKLPFKTFSVDYALEYGTDKLEIHSDGIEKGQNVAIVDDLLATGGTVSGVSKLVEKIGGHVSALNFV 147          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_RHORT (Adenine phosphoribosyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=apt PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16
Identity = 47/107 (43.93%), Postives = 67/107 (62.62%), Query Frame = 2
Query:  122 FSVSLSFRHKLFSEPSPSVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSM 442
            + V++    K+ +   P V  L GI++RGF+   P+A  +G  FV +RK  KLPG  +  EY+LEYG   +E+   AV  G+R +I+DDL+A GGTL+AA  LLG M
Sbjct:   33 WQVTMGRMAKVVAPRLPDV--LAGIESRGFLVAAPLALKLGLGFVMVRKKGKLPGATVRHEYALEYGTDTVEVQEGAVLPGQRVVILDDLLATGGTLNAASELLGKM 137          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_RHILW (Adenine phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=apt PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  185 LQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHIFILIYIQMLNACF 493
            + G++ARGFI G  +A  + + FVP+RK  KLP E +   YSLEYG   MEMH  AVQ GE+ ++VDDL+A GGT   A +LL          I  +++ ACF
Sbjct:   58 IAGMEARGFILGGAVAHQLSSGFVPIRKKGKLPHETVRIAYSLEYGVDEMEMHRDAVQPGEKVILVDDLIATGGTAVGATKLLRQ--------IGAEVVGACF 152          
The following BLAST results are available for this feature:
BLAST of FC930892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_BACC14.288e-1644.55Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_BACC04.288e-1644.55Adenine phosphoribosyltransferase OS=Bacillus cere... [more]
APT_BACAN4.288e-1644.55Adenine phosphoribosyltransferase OS=Bacillus anth... [more]
APT_BACAH4.288e-1644.55Adenine phosphoribosyltransferase OS=Bacillus thur... [more]
APT_BACAC4.288e-1644.55Adenine phosphoribosyltransferase OS=Bacillus anth... [more]
APT_BACAA4.288e-1644.55Adenine phosphoribosyltransferase OS=Bacillus anth... [more]
APT_ACISJ4.288e-1649.38Adenine phosphoribosyltransferase OS=Acidovorax sp... [more]
APT2_METM74.288e-1640.00Adenine phosphoribosyltransferase 2 OS=Methanococc... [more]
APT_RHORT5.600e-1643.93Adenine phosphoribosyltransferase OS=Rhodospirillu... [more]
APT_RHILW5.600e-1645.63Adenine phosphoribosyltransferase OS=Rhizobium leg... [more]

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Properties
Property NameValue
Genbank descriptionC34110B08EF PostHarvP1 Citrus clementina cDNA clone C34110B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930892 ID=FC930892; Name=FC930892; organism=Citrus clementina; type=EST; length=740bp
GACCAAACATTTTTCCTCACTCTCTCATAATAGAAACCCTAGAATAAAAA
TCGATCAGAAAAGCCACCATTCTGCCACCGTCCAAACCATCATTCTCAAT
TGGACACCCATTTCGCATCGTTTTTCAGTCTCTTTGTCCTTTCGCCACAA
GTTGTTCAGCGAACCCTCACCTTCGGTTCGATTCTTGCAAGGTATTAAAG
CTAGGGGTTTTATATTTGGGCCTCCTATTGCATGGGCTATTGGGGCATAG
TTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAGATTATTTCCGA
AGAGTATTCCTTGGAATATGGAAAATATGTAATGGAGATGCATGTATGTG
CTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAATT
GGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGGTAGTATGCAAAACCA
TATATTTATATTGATATACATACAAATGCTGAATGCTTGCTTTTCTTCAT
ACATTCTTCTTTTTTCATACAGCTGCTGTTTTTGCTGTCGAAATGTGCAA
AGATAGCTGCTGTTGTTCTGTTCAAAAGTGCAGAAACAACAGTTGTTTCT
GCTGTTTTGAACAGGAAAAACAGTAGCTGTGTCTGAAATGCACTGATGAT
TCGTGTCTGAATTAATTTTGTTCCCATGAATCTTGCAGTCGCTTTGTAGT
TTTAATTTCATTAAGCGCTGTCAGAGATGTATTGTACTGG
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