FC930894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.283e-43 Identity = 94/177 (53.11%), Postives = 108/177 (61.02%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ DW Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG ++L + N RPLEVFMCS Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCS 179
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.283e-43 Identity = 95/177 (53.67%), Postives = 108/177 (61.02%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ DW Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH ARRVW ER ESK+ NVP L+LGNKID P A SEE LR GL TTGKG V+L + N RPLEVFMCS Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCS 179
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.512e-43 Identity = 94/174 (54.02%), Postives = 112/174 (64.37%), Query Frame = 1 Query: 127 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 MF+++WFY LA LGL K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ER +ESK VPFL+LGNKID P A SE+EL+ LGL TTGKG V+ +RP+EVFMCS Sbjct: 1 MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRPIEVFMCS 172
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.242e-42 Identity = 93/174 (53.45%), Postives = 111/174 (63.79%), Query Frame = 1 Query: 127 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 M+L WFY +L++LGL K K+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEELS+G +KF FDLGGHQ ARR+W ER E+K VPF+VLGNKID P A SE+ELR LGL TTGKG+V L +RP+EVFMCS Sbjct: 1 MWLWSWFYDILSNLGLLNKHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQ-TTGKGRVPL--EGIRPIEVFMCS 171
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 1.052e-41 Identity = 94/174 (54.02%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 127 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 M++ DWF VLASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ER AESK VPFL+LGNKID A E EL+ LGL N TTGK L + RP+EVFM S Sbjct: 1 MWIFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYN-TTGKDVTKLPEGQ-RPIEVFMVS 172
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.060e-41 Identity = 86/173 (49.71%), Postives = 108/173 (62.43%), Query Frame = 1 Query: 130 FLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 FL DWF GVL LGL K+ K++FLGLDNAGKTTLLHMLKD+R+ QH PT +PTSE++S+G I F +DLGGH ARRVW ER ES+ +VP L+LGNKID P A SE++L++ L + + TGKG V+ + RP+EVFMCS Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCS 175
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41 Identity = 91/177 (51.41%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L + N RP+EVFMCS Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCS 179
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 6.817e-41 Identity = 91/177 (51.41%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L + N RP+EVFMCS Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCS 179
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.163e-40 Identity = 91/177 (51.41%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L + N RP+EVFMCS Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCS 179
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.163e-40 Identity = 91/177 (51.41%), Postives = 106/177 (59.89%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ +W Y VL LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L + N RP+EVFMCS Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCS 179 The following BLAST results are available for this feature:
BLAST of FC930894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930894 ID=FC930894; Name=FC930894; organism=Citrus clementina; type=EST; length=649bpback to top |