FC930898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.834e-18 Identity = 50/172 (29.07%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASG 643 GTTI GV Y G VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+ + P+ F+ ++ M +EEA+ LV +A++ I D SG Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSG 213
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB10_HUMAN (Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 116 PHSM--GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 PH+ GTTI G+ + G +LGAD+R + VA+++ +KI + +Y C +G AAD++ + V + H + G+ V ++R + + + +IVGG D G ++YGV G+ PF + ++ MT E A+ L+V+AV+ I D SGG V Sbjct: 33 PHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVD-LTGPQLYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNV 212
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB10_BOVIN (Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17 Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 2 Query: 116 PHSM--GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 PH+ GTTI G+ + G +LGAD+R + VA++ +KI + +Y C +G AAD++ + + H + G+ V ++R + + ++ +IVGG D + G ++Y V G+ PF + ++ MT E A+ L+V+A++ I D SGG V Sbjct: 33 PHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAADAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGASLIVGGVD-FTGPQLYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGGNV 212
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_SULSO (Proteasome subunit beta OS=Sulfolobus solfataricus GN=psmB PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16 Identity = 53/177 (29.94%), Postives = 89/177 (50.28%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASG-GVV 652 GTT +G+ N G +L AD R S G +VAN+ K+ +TD + + +GS AD Q + D ++ H ++I P ++K +A L +LS +++GG+D + +++ + G I E+ + G + + MT +EA L +AV AI RD +G GV+ Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVLKNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVI 188
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB10_RAT (Proteasome subunit beta type-10 OS=Rattus norvegicus GN=Psmb10 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16 Identity = 49/175 (28.00%), Postives = 84/175 (48.00%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 GTTI G+ + G +LGAD+R + VA+++ +KI + +Y C +G AAD++ + + H + G+ V ++R + + + +IVGG D G ++Y V G+ PF + ++ MT E A+ L+V+A++ I D SGG V Sbjct: 39 GTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVD-LNGPQLYSVHPHGSYSRLPFTALGSGQDAAVALLEDRFQPNMTLEAAQELLVEAITAGILGDLGSGGSV 212
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16 Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 GTT + + G ++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L+ + YN + L G ++ GWD+ G Y GG + F++ Y YG D +K MT EEA L +A+ A RDGASGGVV Sbjct: 55 GTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSP-YAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVV 229
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB5A_ARATH (Proteasome subunit beta type-5-A OS=Arabidopsis thaliana GN=PBE1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16 Identity = 54/178 (30.34%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 119 HSMGTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGV 649 H+ GTT + + GG ++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+ G Y GG + F++ Y YG D +K M+ EEA L +++ A RDGASGGV Sbjct: 54 HAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGV 230
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB10_MOUSE (Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16 Identity = 50/181 (27.62%), Postives = 87/181 (48.07%), Query Frame = 2 Query: 116 PHSM--GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 PH+ GTTI G+ + G +LGAD+R + VA+++ +KI + +Y C +G AAD++ + + H + G+ V ++R + + + ++VGG D G ++Y V G+ PF + ++ MT E A+ L+V+A++ I D SGG V Sbjct: 33 PHARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVD-LNGPQLYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNV 212
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.326e-15 Identity = 56/181 (30.94%), Postives = 86/181 (47.51%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVVRTVTL 667 GTT +G+ G VL AD R S G + R KI ++ +++ + +G D + +R + Q G+ +VK A L+ + K F +VGG+D E K+Y V + G I E +A + Y D +K+ +T EE L VKA++ AI RD SG + VT+ Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYD--EKPKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTI 188
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = 2 Query: 110 NAPHSMGTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVVRTVTL 667 N + GTT +GV G VL ++ R + G ++A++ + K+ Q+ D V + +GS D+Q + V + ++ + T+K L+ LS N + +++GG DK G IY + +GG+I E + YG + ++E MT +E L ++A+ A RD ASG + V + Sbjct: 3 NDKYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDK-NGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVI 189 The following BLAST results are available for this feature:
BLAST of FC930898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930898 ID=FC930898; Name=FC930898; organism=Citrus clementina; type=EST; length=670bpback to top |