FC930898
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_ARCFU (Proteasome subunit beta OS=Archaeoglobus fulgidus GN=psmB PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.767e-15 Identity = 51/182 (28.02%), Postives = 92/182 (50.55%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVVRTVTL 667 GTT +G+ G V+ + R + G ++A++A+ KI Q+ D + + +GS D+Q ++ ++ + + I+ + TV+ A L L + + F +++GG D EG IY + P+GG I E+ YG + + + +EA L V+A+ A+ RD ASG + V + Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDS-EGKSIYSIDPIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKI 191
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.508e-14 Identity = 56/180 (31.11%), Postives = 87/180 (48.33%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAAD----SQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 GTT + Y GG ++ DS+++ G YVA+R+ K+ ++T + +G AAD + + R + ++ + A K+ AN+V Y+ K + L G ++ GWDK G ++Y V GT + Y YG D +K M EEA L +AV A RD SGG + Sbjct: 62 GTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIV----YSYKGYGLSMGTMITGWDK-TGPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAVYHATHRDAYSGGAI 236
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 50/184 (27.17%), Postives = 98/184 (53.26%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF---LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGG--VVRTVT 664 GTT +G+T G V + R S G +A++A+DKI ++ +++ +GS AD+Q++ Y++ + ++ + +++ AA L + ++++ + +QT ++GG D+ G KIY + G +I F YG + + + + +EA + ++A+ A+ RD SG +V TVT Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQT--LLGGVDE-NGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVT 189
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGV 649 GTT + + G ++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+ G Y GG + F++ Y YG D +K M+ EEA L +++ A RDGASGGV Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSP-YAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGV 230
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14 Identity = 47/176 (26.70%), Postives = 85/176 (48.30%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 GTT + + G ++ DSR + G Y+++ +K+ ++ ++ SG AAD Q + + ++ G+ +V A+ L+ + Y + L G ++ GWDK +G +Y V GT + Y YG D ++ ++ EEA L +A++ A RD SGG++ Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDK-KGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGII 246
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 52/177 (29.38%), Postives = 83/177 (46.89%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 GTT + + G ++ DSR S G Y+A +K+ ++ + SG AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK +G +Y V GT + Y YG D +++ ++ EEA L +A+ A RD SGGVV Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVV 246
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB8_MOUSE (Proteasome subunit beta type-8 OS=Mus musculus GN=Psmb8 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.177e-13 Identity = 50/177 (28.25%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 GTT + + G ++ DSR + G Y+++ +K+ ++ + SG AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK +G +Y V GT + Y YG D +++ ++ EEA L +A++ A RD SGGVV Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVV 246
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13 Identity = 47/174 (27.01%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASG 643 GTT +G+ + +L D R S G VA++ + K+ ++ D + + +GS D+Q + + + ++ G+ A L+ + ++++ F T +I+GG+D EG K++ + PLGG E+ F YG + + M+ EE L + A+ A+ RD SG Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSG 179
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 49/181 (27.07%), Postives = 90/181 (49.72%), Query Frame = 2 Query: 128 GTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG-MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVVRTVTL 667 GTT +G+ G VL AD+R S G + + KI ++ +++ + +G D + ++ + + +G+ +VK A L+ + +K F G +VGG+D E +++ V + G I E +A + Y D ++E M+ + L VKA+++AI RD +G + VT+ Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYD--EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTI 188
BLAST of FC930898 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.272e-13 Identity = 45/177 (25.42%), Postives = 85/177 (48.02%), Query Frame = 2 Query: 122 SMGTTIIGVTYNGGFVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEALVVKAVSLAIARDGASGGVV 652 S GTTI+GV +N G V+ AD+R++ G VA++ K+ +++ ++ +G+AAD++ V+ + + H++ + V A +++ + + + +IV G D G ++ + G+ + + WK+ +TKEEA L A+ I D SG V Sbjct: 27 STGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDP-TGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNV 202 The following BLAST results are available for this feature:
BLAST of FC930898 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930898 ID=FC930898; Name=FC930898; organism=Citrus clementina; type=EST; length=670bpback to top |