FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_MACCJ (Elongation factor Tu OS=Macrococcus caseolyticus (strain JCSC5402) GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 53/166 (31.93%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT-----TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+DA+D I P+R SDKP +P++DV+ I G GTV GRVE G +K G V GLT T V VEM + L A GDN+G ++ V+ +D++RG V +K F ++V +++ + G + P + + +++ ++ G E+ Sbjct: 192 LMDAVDEYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGEEVEI--IGLTEEPSKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREDVQRGQVL--AKPGSITPHTKFKAEVYVLSK--EEGGRHTPFFTNYRPQFYFRTTDVTGVVNLPEGTEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_LACRJ (Elongation factor Tu OS=Lactobacillus reuteri (strain JCM 1112) GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+D +D+ I PKRP+DKP +P++DV+ I G GTV GR++ G +K G +V L + V +EM H+ L GDNVG ++ ++ ++RG V ++ + NF +V +M + G + P + +++ I+ G E+ Sbjct: 193 LMDVIDDYIPTPKRPTDKPFMMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLTEDVLKSTVTGLEMFHKTLDLGEAGDNVGVLLRGISHDQIQRGQVL--AEPGSIQTHKNFKGEVYVMTK--EEGGRHTPFFSNYRPQFYFHTTDVTGTIELPDGVEM 352
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_LACRD (Elongation factor Tu OS=Lactobacillus reuteri (strain DSM 20016) GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+D +D+ I PKRP+DKP +P++DV+ I G GTV GR++ G +K G +V L + V +EM H+ L GDNVG ++ ++ ++RG V ++ + NF +V +M + G + P + +++ I+ G E+ Sbjct: 193 LMDVIDDYIPTPKRPTDKPFMMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLTEDVLKSTVTGLEMFHKTLDLGEAGDNVGVLLRGISHDQIQRGQVL--AEPGSIQTHKNFKGEVYVMTK--EEGGRHTPFFSNYRPQFYFHTTDVTGTIELPDGVEM 352
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_FIBSS (Elongation factor Tu OS=Fibrobacter succinogenes (strain ATCC 19169 / S85) GN=tuf1 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 58/176 (32.95%), Postives = 84/176 (47.73%), Query Frame = 1 Query: 49 FEGDNM-IERSTNLDWYKGPT--------LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQ---IGNGYAPVLDCHTSHI 531 F+GDN I R + L +G L++A D I P+R +DKP +P++DV+ I G GTV GR+E GV++ V G TTE + VEM + L +A GDNVG ++ KD+ RG V + K V+ + G+ NGY P T+ + Sbjct: 163 FDGDNTPIIRGSALKALEGDPEYQDKVMELMNACDEYIPLPQRDTDKPFLMPIEDVFTITGRGTVATGRIERGVVRLNDKVERIGLGETTEYVITGVEMFRKLLDDAQAGDNVGLLLRGAEKKDIVRGMVLAAPKSVTPHTEFKAEIYVLTKDEGGRHTPFMNGYRPQFYFRTTDV 338
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CYAA5 (Elongation factor Tu OS=Cyanothece sp. (strain ATCC 51142) GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 124 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 DNI EP+R DKP + ++DV+ I G GTV GR+E G +K G + +T V VEM + L E + GDNVG ++ + +D++RG V Sbjct: 208 DNIPEPEREIDKPFLMAVEDVFSISGRGTVATGRIERGKVKVGETIEIVGIRDTRSTTVTGVEMFQKTLDEGMAGDNVGLLLRGIKKEDIERGMV 302
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BORBZ (Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 109 LLDALDNINE-PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 408 LL+++DN + P+R DKP L ++DV+ I G GTV GR+E G++K G V T T V VEM + L++ GDNVG ++ V KD++RG V S Sbjct: 193 LLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLS 295
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BORBU (Elongation factor Tu OS=Borrelia burgdorferi GN=tuf PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 109 LLDALDNINE-PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVAS 408 LL+++DN + P+R DKP L ++DV+ I G GTV GR+E G++K G V T T V VEM + L++ GDNVG ++ V KD++RG V S Sbjct: 193 LLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTVATGRIERGIIKVGQEVEIVGIKETRKTTVTGVEMFQKILEQGQAGDNVGLLLRGVDKKDIERGQVLS 295
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ACIAD (Elongation factor Tu OS=Acinetobacter sp. (strain ADP1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ALD I EP+R DK +P++DV+ I G GTV GRVE G++K G V TT V VEM + L E G+N G ++ +D++RG V +K + F ++V +++ + G + P L+ + + +++ I + G E+ Sbjct: 194 LVEALDTYIPEPERAIDKAFLMPIEDVFSISGRGTVVTGRVEAGIVKVGESVEIVGIRDTQTTTVTGVEMFRKLLDEGRAGENCGVLLRGTKREDVQRGQVL--AKPGTIKPHTKFDAEVYVLSK--EEGGRHTPFLNGYRPQFYFRTTDVTGAIQLKEGVEM 352
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU1_STRAW (Elongation factor Tu 1 OS=Streptomyces avermitilis GN=tuf1 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 19 EKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +S EGD +W G ++LD + +NI +P+R DKP +P++DV+ I G GTV GR+E GVLK +V TT V +EM + L E G+NVG ++ + +D++RG V Sbjct: 168 DDLPVVKVSALKALEGDK--------EW--GQSVLDLMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLKVNETVDIVGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQV 295
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_CHRSD (Sulfate adenylyltransferase subunit 1 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=cysN PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 55/187 (29.41%), Postives = 90/187 (48.13%), Query Frame = 1 Query: 10 INPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG-FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKID 567 +N + FVP+S EGDN++ +S + WY+GP LL L+ + + LRLP+Q V + G +E G+L+PG V PSG + V + L+EA PG + + + D+ RG ++ + + P +A F + ++ M H + G L T +A K +T+ID Sbjct: 191 LNAPDIHFVPLSALEGDNVVNKSEAMSWYEGPALLHLLETVEVTHDKNLTDLRLPVQYVNRPHLDFRGYCGTLEAGILRPGQRVKVLPSGKASTVARIVTFDGDLEEAYPGQAITVTLDDEI--DISRGDWLVAEDAEVPLADA--FEADIVWM-HDTALEPGRLYDLKLATRDLAGK----ITRID 368 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |