FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRSV (Elongation factor Tu OS=Streptococcus sanguinis (strain SK36) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 49/166 (29.52%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVK-----SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+D +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K + G+ E++ VEM + L E L GDNVG ++ + +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMDTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEI--VGIKEEIQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGIQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STREM (Elongation factor Tu OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 50/166 (30.12%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVK-----SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+D +D+ I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ + G+ E+K VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEI--VGIRDEIKKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STACT (Elongation factor Tu OS=Staphylococcus carnosus (strain TM300) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 L+ A+D+ I P+R SDKP +P++DV+ I G GTV GRVE G +K G ++ + T V VEM + L A GDN+G ++ VA +D++RG V Sbjct: 192 LMQAVDDYIPTPERDSDKPFMMPVEDVFSITGRGTVATGRVERGQIKVGEEVEIIGITEESMKTTVTGVEMFRKLLDYAEAGDNIGALLRGVAREDVQRGQV 293
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SODGM (Elongation factor Tu OS=Sodalis glossinidius (strain morsitans) GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 54/163 (33.13%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF-GPSGLT-TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L +ALD+ I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G T T VEM + L E G+NVG ++ D++RG V +K + F S+V I++ G + P + + +++ I+ G E+ Sbjct: 192 LAEALDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDDVERGQVL--AKPGSIKPHTQFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 48/133 (36.09%), Postives = 73/133 (54.89%), Query Frame = 1 Query: 19 EKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +SG + + E +D L+DA+D +I EP+R +KP + ++DV+ I G GTV GR+E G +K G +V S TT V VEM + L E L GDN G ++ + +D++RG V Sbjct: 166 DDIPIVQVSGLKAIEGEAEWEAKID-----ELMDAVDTSIPEPEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTT-VTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_METI4 (Elongation factor Tu OS=Methylacidiphilum infernorum (isolate V4) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 57/183 (31.15%), Postives = 87/183 (47.54%), Query Frame = 1 Query: 19 EKVPFVP---ISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK---PGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHI 531 +K+P + + EGD E++ L++A+DN I P+RP D+P +P++DV+ I G GTV GRVE G LK +V P+ T V +EM + L A GDNVG ++ + D++RG V +K F +QV ++ NGY P T+ + Sbjct: 166 DKIPIIKGSALKALEGDPEYEKNIL-------ELVEAMDNYIPIPERPKDQPFLMPIEDVFNIEGRGTVVTGRVERGTLKRMEEVEIVGIRPT-TKTVVTDIEMFRKTLDTAEAGDNVGLLLRGIKKDDVERGQVV--AKPGTITPHHKFNAQVYVLKKEEGGRHTAFFNGYRPQFFFRTTDV 338
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_MESVI (Elongation factor Tu, chloroplastic OS=Mesostigma viride GN=tufA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 56/207 (27.05%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 58 DNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 D+ + R +N K L+D +D I P+R +DKP + ++DV+ I G GTV GRVE G + G +V T V +EM + L+E++ GDNVG ++ + ++RG V +K + + F S+V ++ + G + P + V+ +++ KID + + + + GD + + QP+ +E Sbjct: 185 DSKLARGSNPWVDKIYALMDQVDKYIPTPQRDTDKPFLMAIEDVFSITGRGTVATGRVERGKVVVGENVDIVGLANIPQNTTVTGLEMFQKTLEESVAGDNVGVLLRGIQKDQVERGMVL--AKPNTIKPHIRFESEVYVL--AKEEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFKADD-GSDTQMVMPGDRVKMVVSLIQPIAIE 386
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DICNV (Elongation factor Tu OS=Dichelobacter nodosus (strain VCS1703A) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 48/125 (38.40%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 471 L+DALD +I EPKR DKP +P++DV+ I G GTV GRVE GV+K G +V + TT VEM + L + GDNVG ++ ++++RG V +K F S+V +++ Sbjct: 194 LVDALDASIPEPKRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVVKVGDELEIVGLRDTAKTT-CTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVL--AKPGTITPHTKFESEVYVLS 315
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DEIGD (Elongation factor Tu OS=Deinococcus geothermalis (strain DSM 11300) GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 LLDA+D I P+R +DK +P++DV+ I G GTV GRVE GV K G V GL T + VEMH + L + + GDNVG ++ VA D++RG V Sbjct: 203 LLDAIDAYIPTPERATDKTFLMPVEDVFTITGRGTVATGRVERGVCKVGDEVEI--VGLRDTKKTTITGVEMHRKLLDQGMAGDNVGVLLRGVARDDVERGQV 303
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_XANOR (Elongation factor Tu OS=Xanthomonas oryzae pv. oryzae GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 49/163 (30.06%), Postives = 79/163 (48.47%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+DALD I EP R D+P +P++DV+ I G GTV GR+E G++K G + T T V VEM + L + GDN G ++ D++RG V K + F ++V +++ G + P + + + +++ ID G E+ Sbjct: 194 LVDALDTFIPEPTRDVDRPFLMPVEDVFSISGRGTVVTGRIERGIIKVGDEIEIVGIRATQKTTVTGVEMFRKLLDQGQAGDNAGLLLRGTKRDDVERGQVL--CKPGSIKPHTEFEAEVYVLSK--DEGGRHTPFFKGYRPQLYFRTTDITGAIDLPEGVEM 352 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |