FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 471 L+DA+D +I +P R +D+P +P++DV+ I G GTV GRVE G++ +V P+ T V VEM + L + GDNVG ++ + +D++RG V K F QV I++ Sbjct: 193 LMDAVDESIPDPVRETDRPFLMPVEDVFTITGRGTVVTGRVERGIINVNEEVEIVGIRPTSTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQVV--VKPGTTTPHTEFEGQVYILS 315
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_HAEDU (Elongation factor Tu OS=Haemophilus ducreyi GN=tufA PE=3 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 53/179 (29.61%), Postives = 87/179 (48.60%), Query Frame = 1 Query: 58 DNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 + +IE + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ Sbjct: 187 EKIIELAQHLDSY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_GEOKA (Elongation factor Tu OS=Geobacillus kaustophilus GN=tuf PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK---PGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 L++A+D I P+R DKP +P++DV+ I G GTV GRVE G LK P ++ TT V VEM + L +A GDN+G ++ V+ +++RG V +K F +QV ++ Sbjct: 192 LMNAVDEYIPTPQREVDKPFMMPIEDVFSITGRGTVATGRVERGTLKVGDPVEIIGLSDEPKTTTVTGVEMFRKLLDQAEAGDNIGALLRGVSRDEVERGQVL--AKPGSITPHTKFKAQVYVL 313
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_DEIRA (Elongation factor Tu OS=Deinococcus radiodurans GN=tufA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT----TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN------HPGQIGNGYAPVLDCHTSHI 531 LLDA+D+ I P+R +DK +P++DV+ I G GTV GRVE G +K V GLT T V +EMH + L + GDNVG ++ VA D++RG V +K + F + V +++ H G GY P T+ + Sbjct: 203 LLDAVDSYIPTPERDTDKTFLMPVEDVFTITGRGTVATGRVERGTVKVQDEVEI--VGLTDTRKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVL--AKPGSIKPHTKFEASVYVLSKDEGGRHSAFFG-GYRPQFYFRTTDV 349
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP7 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7424) GN=tuf PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 88 DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 DW K L+D +D I P+R DKP + ++DV+ I G GTV GR+E G +K G +V +T V VEM + L+E L GDNVG ++ V ++++RG V +K + F +V ++ Sbjct: 194 DWVDKILALMDEVDAYIPTPERDIDKPFLMAIEDVFSISGRGTVATGRIERGKIKAGETVEIVGIKEKTKSTTVTGVEMFQKTLEEGLAGDNVGLLLRGVQKEEIERGMVI--AKPGSIKPHTQFEGEVYVL 323
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 49/156 (31.41%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 130 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 I P+RP+DK +P++DV+ I G GTV GRVETG LK G +V V VEM + L AL GDN+G ++ V +D++RG V +K F QV ++ + G + P + + + +++ I G E+ Sbjct: 202 IPTPERPTDKAFLMPIEDVFTITGRGTVATGRVETGTLKVGDEVEIVGMKDEITKVVVTGVEMFRKILDSALAGDNIGALLRGVQREDIERGQVL--AKPGSITPHNKFVGQVYVLKK--EEGGRHTPFFNGYRPQFYFRTTDVTGSIQLPDGVEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPN (Elongation factor Tu OS=Chlamydia pneumoniae GN=tuf PE=3 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 42/117 (35.90%), Postives = 62/117 (52.99%), Query Frame = 1 Query: 124 DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 DNI P+R DKP +P++DV+ I G GTV GR+E G++K V G T E V VEM + L E G+NVG ++ + D++RG V + + + F S V ++ Sbjct: 198 DNIPTPEREIDKPFLMPIEDVFSISGRGTVVTGRIERGIVKVSDKVQLVGLGETKETIVTGVEMFRKELPEGRAGENVGLLLRGIGKNDVERGMVV--CQPNSVKPHTKFKSAVYVL 312
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CAMLR (Elongation factor Tu OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=tuf PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 54/189 (28.57%), Postives = 86/189 (45.50%), Query Frame = 1 Query: 40 ISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 ISG + E D +LD + D I P R +DK +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +D++RG V + K +F ++V I+N G + P + + V+ +++ I G E+ Sbjct: 171 ISGSALQALEEAKAGQDGEWSKKILDLMAAVDDYIPTPARDTDKDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIRDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEDVERGMVLAKPKS--ITPHTDFEAEVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGAIKLAEGVEM 355
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF--GPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRS 576 L++A+D+ I P+R ++ P L ++DV+ I G GTV GRVE G ++ G V T V VEM + L EAL GDNVG ++ + D++RG V +K F++ V ++ +GY P T+ + K +E++ D S Sbjct: 272 LMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGTVATGRVERGTIRVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVL--AKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEES 433
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU1_ORITB (Elongation factor Tu 1 OS=Orientia tsutsugamushi (strain Boryong) GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 51/165 (30.91%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+DA+D+ I +P R D+P +P++DV+ I G GTV GR+E GV+K G V GL + K+ VEM + L + GDNVG ++ + +D++RG V +K +F ++V ++ + G + P + + +++ +I SGKE+ Sbjct: 192 LMDAIDDYIPQPTRVLDQPFLMPIEDVFSILGRGTVVTGRIERGVIKVGDEVEI--VGLRSTQKTICTGVEMFKKELDQGQAGDNVGILLRGIKREDVERGQVL--AKPGTITPHCSFEAEVYVLTK--EEGGRHTPFFQNYRPQFYCRTTDVTGEIALLSGKEM 350 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |