FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_SALPK (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi A (strain AKU_12601) GN=cysN PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 58/216 (26.85%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG--FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 + FVP+S EGDN+ +S N+ WY GPTLL+ L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + +EA G+ + + + D+ RG +A+N PAR AA V + P G Y L + ++ I+ + +++E P NG G+V+M +P+ ++ Sbjct: 200 IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKMLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDI--DISRGDLLLAANETLAPARHAA--IDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLP---LNG-IGLVEMTFDEPLALD 407
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_SALPA (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi A GN=cysN PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 58/216 (26.85%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG--FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 + FVP+S EGDN+ +S N+ WY GPTLL+ L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + +EA G+ + + + D+ RG +A+N PAR AA V + P G Y L + ++ I+ + +++E P NG G+V+M +P+ ++ Sbjct: 200 IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKMLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDI--DISRGDLLLAANETLAPARHAA--IDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLP---LNG-IGLVEMTFDEPLALD 407
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_XYLFA (Elongation factor Tu OS=Xylella fastidiosa GN=tufA PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 49/164 (29.88%), Postives = 85/164 (51.83%), Query Frame = 1 Query: 109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L +ALD +I P+R D+P +P++DV+ I G GTV GRVE GV+K G +V P+ T V VEM + L + GDN G ++ +++RG V +K + F ++V +++ + G + P + +T ++ +++ K+ G E+ Sbjct: 194 LAEALDTHIPNPERAIDRPFLMPVEDVFSISGRGTVVTGRVECGVIKVGDEVEIVGIRPTSKTI-VTGVEMFRKLLDQGQAGDNAGLLLRGTKRDEVERGQVL--AKPGSIKAHKEFEAEVYVLSK--EEGGRHTPFFNGYTPQFYMRTTDITGKVCLPEGVEM 352
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SYNSC (Elongation factor Tu OS=Synechococcus sp. (strain CC9605) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 19 EKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +SG + IE + K L+ A+D+ I EP+R DKP + ++DV+ I G GTV GR+E G++K G + T T V VEM + L E + GDNVG ++ + +D++RG V Sbjct: 166 DDIPVVQVSGLKA---IEGEAEWE-AKIEELMAAVDSSIPEPEREVDKPFLMAVEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS3 (Elongation factor Tu OS=Synechococcus sp. (strain CC9311) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 47/131 (35.88%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 19 EKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +SG + IE + K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G++K G + V T V VEM + L E + GDNVG ++ + +D++RG V Sbjct: 166 DDIPVVQVSGLKA---IEGEAEWE-AKIEELMAAVDASIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVGEEVEVVGIREPRKTTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SYNR3 (Elongation factor Tu OS=Synechococcus sp. (strain RCC307) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1 Query: 19 EKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +SG + + E +D L+ A+D NI EP R DKP + ++DV+ I G GTV GR+E G++K G + T + V VEM + L E + GDNVG ++ + +D++RG V Sbjct: 166 DDIPVVQVSGLKAIEGEAEWEAKID-----ELMAAVDANIPEPVREVDKPFLMAVEDVFSITGRGTVATGRIERGIVKVGEEIEIVGIKDTRKSTVTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRP1 (Elongation factor Tu OS=Streptococcus pyogenes serotype M1 GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+D +D+ I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I++ G + P + + + +++ I+ +G E+ Sbjct: 195 LMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGIKEETKKAVVTGVEMFRKQLDEGLAGDNVGILLRGVQRDEIERGQVI--AKPSSINPHTKFKGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_RICAH (Elongation factor Tu OS=Rickettsia akari (strain Hartford) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN 471 L+DA+DN I P R +DKP +P++DV+ I G GTV GRVE+G++K G V T T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ Sbjct: 192 LMDAVDNYIPHPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEVEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDQFEAEVYVLS 313
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_PROM1 (Elongation factor Tu OS=Prochlorococcus marinus (strain NATL1A) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 50/133 (37.59%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 19 EKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 + +P V +SG + IE DW K L+ A+D +I EP+R DKP + ++DV+ I G GTV GR+E G + G +V + LTT V VEM + L E + GDNVG ++ + +D++RG V Sbjct: 166 DDIPVVQVSGLKA---IEGEA--DWETKIDDLMTAVDASIPEPEREIDKPFLMAVEDVFSITGRGTVATGRIERGKVTVGEEVEIVGIRDTRLTT-VTGVEMFRKLLDEGMAGDNVGLLLRGIQKEDIERGMV 292
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 49/164 (29.88%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+DA+D+ I EP R DKP +P++DV+ I G GTV GR+E+GV+K G +V P+ + V +EM + L + GDN G + V ++L+RG V +K F ++V I+ + G + P + + + +++ + G E+ Sbjct: 191 LMDAVDSYIPEPVRDVDKPFLMPIEDVFSISGRGTVGTGRIESGVIKIGEEVEIVGIKPTRKSV-VTGIEMFQKTLDQGQAGDNAGILFRGVDKEELERGMVI--AKPGTITPHTKFKAEVYILKK--EEGGRHTPFFNNYRPQFYFRTTDVTGAVTLPEGVEM 349 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |