FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 19 EKVPFVPISGF---EGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 E+ P V +S EGD +S L++A+D +I +P R +DKP +P++DV+ I G GTV GRVE G++ +V P T V VEM + L + GDNVG ++ + +D++RG V Sbjct: 167 EEAPVVKVSALKALEGDEKWVKSVE-------ELMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGIINVNEEVEIVGIRPDTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGIKREDVERGQV 294
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHP (Elongation factor Tu OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=tuf PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 58/194 (29.90%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 46 GFEGDNM-IERSTNLDWYKGPT--------LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 GF+GDN I + L +G L+DA+D I EPKR +DKP + ++DV+ I G GTV GRVE GVL+ +V P+ T V +EM + L+EA GDN G ++ + +++RG V + K F + V ++ + G + P + + +++ I+ + G+E+ Sbjct: 165 GFDGDNAPIIAGSALKALQGDPEYEKGILELMDAVDTYIEEPKRETDKPFLMAVEDVFTITGRGTVATGRVERGVLQLNEEVEIVGLKPTKKTV-VTGIEMFRKNLKEAQAGDNAGLLLRGIDRSEVERGQVLAKPKTIVPH--TQFEATVYVLKK--EEGGRHTPFFHNYKPQFYFRTTDVTGGIEFKPGREM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 58 DNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 +N I+R N +W K +L+DA+D I P R +K + ++DV+ I G GTV GR+E G++K G + GL TT + +EM + L E + GDN+G ++ V KD++RG V Sbjct: 185 NNSIQRGEN-EWVDKIHSLMDAVDEYIPTPVRDVEKTFLMAVEDVFSITGRGTVATGRIERGIIKVGDTIEI--VGLRETTTTTITGLEMFQKTLDEGMAGDNIGILLRGVQKKDIERGMV 302
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ERWCT (Elongation factor Tu OS=Erwinia carotovora subsp. atroseptica GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 130 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ VKS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEI--VGIKDTVKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGSIKPHTQFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ENTS8 (Elongation factor Tu OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 57/192 (29.69%), Postives = 90/192 (46.88%), Query Frame = 1 Query: 40 ISGFEGD-----NMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 + EGD +IE + +LD Y I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ Sbjct: 176 LKALEGDAEWEAKIIELAGHLDSY-----------IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKDTAKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGSIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTH (Elongation factor Tu OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I P+R DKP +P++DV+ I G GTV GRVE G LK G +V S T V +EM + L +A+ GDN+G ++ + +++RG V +K + F +QV ++ + G + P + + + +++ ++ G E+ Sbjct: 197 LMEEVDKYIPTPQRDIDKPFAMPVEDVFTITGRGTVATGRVERGTLKMGDEVEIVGLSDSPKKTVVTGIEMFRKLLDQAVAGDNIGALLRGIQRNEVERGQVL--AKPGSIKPHTYFEAQVYVLTK--EEGGRHTPFFNNYRPQFYFRTTDVTGVVELPQGTEM 356
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTE (Elongation factor Tu OS=Clostridium tetani GN=tufA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 47/164 (28.66%), Postives = 83/164 (50.61%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+ A+D I P+R +DKP +P++D++ I G GTV GRVE G+LK G +V + + +EM + L EA GDN+G ++ V +++RG V + + + +FT QV ++ + G + P + + + +++ I G E+ Sbjct: 194 LMAAVDEYIPTPERATDKPFLMPVEDIFTITGRGTVATGRVERGILKVGDEIEIVGLSDESKKSVITGIEMFRKLLDEAQAGDNIGALLRGVQRDEIQRGQVLAAT--GSVKPHKSFTGQVYVLKK--EEGGRHTPFFNGYRPQFYFRTTDVTGSIALPEGVEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BORRA (Elongation factor Tu OS=Borrelia recurrentis (strain A1) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 109 LLDALDNINE-PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 LL+ +DN + P+R DKP L ++DV+ I G GTV GR+E GV+K G V T T V VEM + L++ GDNVG ++ V KD++RG V Sbjct: 193 LLETMDNYFDLPERDIDKPFLLAIEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGEAGDNVGLLLRGVDKKDIERGQV 293
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_BORDL (Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 1 Query: 109 LLDALDNINE-PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 LL+ +DN + P+R DKP L ++DV+ I G GTV GR+E GV+K G V T T V VEM + L++ GDNVG ++ V KD++RG V Sbjct: 193 LLETMDNYFDLPERDIDKPFLLAIEDVFSISGRGTVATGRIERGVIKVGQEVEIVGIRETRKTTVTGVEMFQKILEQGEAGDNVGLLLRGVDKKDIERGQV 293
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_ASTLO (Elongation factor Tu, plastid OS=Astasia longa GN=tufA PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 49/156 (31.41%), Postives = 82/156 (52.56%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV-TFGPSGL-TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKID 567 L+D +D+ I P R +DK L ++DV I G GTV GR+E G +K G V G + +T + +EM ++L EA+ GDNVG ++ + +++RG V +K + F SQV I+ + G + P + + V+ +++ KI+ Sbjct: 202 LMDKIDSYIPTPIRDTDKDFLLAIEDVLSITGRGTVATGRIERGKIKVGETVELIGLKNIKSTTITGLEMFQKSLDEAIAGDNVGVLLRGIQKNEVERGMVI--AKPGTIQPHIKFNSQVYILTK--EEGGRHTPFFEGYKPQFYVRTTDVTGKIE 353 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |