FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTM_ARATH (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 44/126 (34.92%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF-----GPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIM 468 L+DA+D I +P R DKP +P++DV+ I G GTV GR+E GV+K G V G L + V VEM + L GDNVG ++ + +D++RG V +K + F +++ ++ Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEIYVL 372
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: CYSN_SALHS (Sulfate adenylyltransferase subunit 1 OS=Salmonella heidelberg (strain SL476) GN=cysN PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 58/216 (26.85%), Postives = 102/216 (47.22%), Query Frame = 1 Query: 25 VPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRG--FVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPHQPMVVE 666 + FVP+S EGDN+ +S N+ WY GPTLL+ L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + +EA G+ + + + D+ RG +A+N PAR AA V + P G Y L + ++ I+ + +++E P NG G+V+M +P+ ++ Sbjct: 200 IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDI--DISRGDLLLAANETLAPARHAA--IDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAICYQIDINNLTQRDVESLP---LNG-IGLVEMTFDEPLALD 407
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRZT (Elongation factor Tu OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRZP (Elongation factor Tu OS=Streptococcus pneumoniae (strain P1031) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRZJ (Elongation factor Tu OS=Streptococcus pneumoniae (strain JJA) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRR6 (Elongation factor Tu OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRPN (Elongation factor Tu OS=Streptococcus pneumoniae GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRPM (Elongation factor Tu OS=Streptococcus pyogenes serotype M28 GN=tuf PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+D +D+ I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I++ G + P + + + +++ I+ +G E+ Sbjct: 195 LMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGIKEETKKAVVTGVEMFRKQLDEGLAGDNVGILLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRPJ (Elongation factor Tu OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRPI (Elongation factor Tu OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K +V V VEM + L E L GDNVG ++ V +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |